Dataset - Omics, Transcriptomics Omics-Lethal Human Viruses, Ebola Experiment EIHH001

https://doi.org/10.25584/LHVEIHH001/1661909
Biology
Human Health
Integrative Omics
Virology
Immune Response
Ebola
Gene expression profile data
Resource Metadata

Ebola Experiment EIHH001

Processed Omics Data Unavailable

This experiment evaluated Immortalized Human Hepatocyte (IHH) cell line host response to wild-type Ebola viruses Zaire Ebola (ZEBOV '76) and Reston Ebola (REBOV '08) viral infection.

Transcriptomics

  1. Expression profiling by array (mRNA) 
  2. Non-coding RNA profiling by array (miRNA)

Linked Primary Data Accessions

BioProject Accession:  PRJNA274405

GEO Accession: GSE65573 (mRNA and miRNA transcriptome response)

 

Acknowledgment of Federal Funding

The data described here was funded in whole or in part by the National Institute of Allergy and Infectious Diseases, of the National Institutes of Health under award number U19AI106772 and is a contribution of the "Modeling Host Responses to Understand Severe Human Virus Infections" Project at Pacific Northwest National Laboratory. Data generated by the Omics-LHV Core for proteomics, metabolomics, and lipidomics analyses for were performed at Pacific Northwest National Laboratory in the Environmental Molecular Sciences Laboratory, a national scientific user facility sponsored by the Department of Energy’s (DOE) Office, operating under the Battelle Memorial Institute for the DOE under contract number DE-AC05-76RLO1830. 

Data Licensing

CC0 1.0 (project metadata and PNNL DataHub policy default)

Last updated on 2023-01-30T00:09:57+00:00 by LN Anderson

English
Projects (2)
Omics-Lethal Human Virus Project, Ebola
NIAID Modeling Host Responses to Understand Severe Human Virus Infections Research Program Processed Data
People (2)
Lindsey N. Anderson

Lindsey Anderson’s research has been dedicated to the identification and characterization of novel, targeted and non-targeted, functional metabolic interactions using a high-throughput systems biology and computational biology approach. Her expertise in functional metabolism and multidisciplinary...

Katrina Waters

Dr. Katrina Waters is the division director for Biological Sciences at the Pacific Northwest National Laboratory. Waters has a Ph.D. in biochemistry and more than 15 years of experience in microarray and proteomics data analysis. Her research interests are focused on the integration of genomics...

Data Sources (1)
Gene Expression Microarray Platforms
Institutions (2)
National Institutes of Health
University of Wisconsin–Madison
Software (1)
pmartR: Quality Control and Statistics for Mass Spectrometry-Based Biological Data