David Degnan is a biological data scientist who develops bioinformatic and statistical pipelines for multi-omics data, specifically the fields of proteomics, metabolomics, and multi-omics (phenotypic) data integration. He has experience with top-down & bottom-up proteomics analysis, genomics &...
Fusarium sp. DS682 Proteogenomics Statistical Data Analysis of SFA dataset download: 10.25584/KSOmicsFspDS682/1766303 . GitHub Repository Source: https://github.com/lmbramer/Fusarium-sp.-DS-682-Proteogenomics MaxQuant Export Files (txt) Trelliscope Boxplots (jsonp) Fusarium Report (.Rmd, html)...
Rigaku Rapid II Microbeam is one of the most versatile micro-diffraction XRD system in materials analysis, using advanced imaging plate technology for measuring diffraction patterns and diffuse scattering from a wide range of materials. The RAPID™ II Curved Detector X-Ray Diffraction (XRD) System's...
Stanford Synchrotron Radiation Lightsource Experimental Station 14-3b is a bending magnet side station dedicated to X-Ray Imaging and Micro X-Ray Absorption Spectroscopy of biological, biomedical, materials, and geological samples. Station 14-3b is equipped with specialized instrumentation for XRF...
Comprised of 6,426 sample runs, The Environmental Determinants of Diabetes in the Young (TEDDY) proteomics validation study constitutes one of the largest targeted proteomics studies in the literature to date. Making quality control (QC) and donor sample data available to researchers aligns with...
This data is supplementary to the manuscript Expanding the access of wearable silicone wristbands in community-engaged research through best practices in data analysis and integration by Lisa M. Bramer, Holly M. Dixon, David J. Degnan, Diana Rohlman, Julie B. Herbstman, Kim A. Anderson, and Katrina...
A total of 172 children from the DAISY study with multiple plasma samples collected over time, with up to 23 years of follow-up, were characterized via proteomics analysis. Of the children there were 40 controls and 132 cases. All 132 cases had measurements across time relative to IA. Sampling was...
Biomedical Resilience & Readiness in Adverse Operating Environments (BRAVE) Project: Exhaled Breath Condensate (EBC) TMT Proteomic Transformation Data Exhaled breath condensate (EBC) represents a low-cost and non-invasive means of examining respiratory health. EBC has been used to discover and...
Exhaled breath condensate proteomics represent a low-cost, non-invasive alternative for examining upper respiratory health. EBC has previously been used for the discovery and validation of detected exhaled volatiles and non-volatile biomarkers of disease related to upper respiratory system distress...
The literature on the effects of radiation on the properties of various polymers and composites has been briefly reviewed for the purpose of identifying polymeric materials that could be irradiated to improve their performance. Radiation treatment of polymers may lead to cross-linking or chain...
Scientific advancements in healthcare driven both by technological breakthroughs and an aging and increasingly obese population have lead to a changing medical device market. Complex products and devices are being developed to meet the demands of leading edge medical procedures.Specialized materials...
An alternative method is presented for determining the maximum acceptable dose in products irradiated in electron beam processes. When the presentation of an individual product to the radiation field results in a high dose uniformity ratio, this can present a challenge for accurate testing of a...
Ionizing radiation has been found to be widely applicable in modifying the structure and properties of polymers, and can be used to tailor the performance of either bulk materials or surfaces. Fifty years of research in polymer radiation chemistry has led to numerous applications of commercial and...