Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson Snekmer: A scalable pipeline for protein sequence fingerprinting using amino acid recoding (AAR) Snekmer is a software package designed to reduce the representation of protein sequences by combining amino acid reduction (AAR) with the kmer...
Dr. Joshua Elmore is a Chemical Engineer at Pacific Northwest National Laboratory. He received his Ph. D. from the University of Georgia in the Department of Molecular Biology and Biochemistry studying the mechanisms of CRISPR/Cas microbial immune systems in hyperthermophilic Archaea. He was a...
Elise Van Fossen is a Post-Doctorate Research Associate in the Biological Sciences Division. Her research focuses on developing synthetic and chemical biology techniques for microorganism engineering.
Last updated on 2025-01-29T20:22:29+00:00 by LN Anderson pmartR Software Overview The pmartR package provides a single software tool for QC (filtering and normalization), exploratory data analysis (EDA), and statistical analysis (robust to missing data) and includes numerous visualization...
LIQUID Software Overview LIQUID provides users with the capability to process high throughput data and contains a customizable target library and scoring model per project needs. The graphical user interface provides visualization of multiple lines of spectral evidence for each lipid identification...
PerCon SFA, Co-Investigator Vivian Lin earned her PhD in organic chemistry from the University of California, Berkeley with Professor Chris Chang, developing fluorescent probes for imaging redox active small molecules. Afterward, she traveled to Switzerland for a postdoctoral fellowship in the...
Biography Ernesto Nakayasu is a senior research scientist focused on understanding molecular mechanisms of diseases. Nakayasu has been applying systems biology and mass spectrometry-based omics measurements to study how pathogens and metabolic alterations cause human diseases; the goal is to...
Biography Dr. Pubudu Handakumbura is the lead on the Plant and Ecosystem Phenotyping team in PNNL’s Environmental Molecular Sciences Division and the Environmental Molecular Sciences Laboratory (EMSL) user program. She has extensive experience in advanced molecular biology techniques, genetic...
Sneha Couvillion’s current research focuses on deciphering microbial metabolic activity and interactions using a combination of powerful mass-spectrometry (MS)-based omics methods (metabolomics, lipidomics, and proteomics) in a variety of environmental and human health related projects. Expertise...
Andrea is a Post Masters Research Associate at PNNL. She is recently working on the CEDS project, tracking and analyzing historical anthropogenic emissions. Before joining JGCRI, she received her master's in Renewable and Clean Energy and bachelor's in Mechanical Engineering from the University of...
Hamza is a Post Masters Research Associate at JGCRI within the Earth and Biological Sciences Directorate of PNNL. He has recently been working on the CEDS project to help develop a database of historical pollutant emissions for research and analysis. Prior to joining PNNL, Hamza completed graduate...
Smith is an Earth Scientist at PNNL whose recent research has focused on the interactions between air pollution and climate, the potential near-term role of short-lived climate forcers, and the development of comprehensive estimates of historical air pollutant emissions over the industrial era...
Dr. Yinghui Wu is an Assistant Professor in the Department of Computer and Data Sciences, Case School of Engineering at Case Western Reserve University, US, and a joint staff scientist at Pacific Northwest National Lab, US. He received his Ph.D. in Computer Science from the University of Edinburgh...
Sheng Guan is currently pursuing a Ph.D. degree from Case Western Reserve University under the supervision of Dr. Yinghui Wu. Sheng got his master’s and bachelor’s degree from Florida International University (major in computer science, 2017), The Hong Kong University of Science &Technology (major...
