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https://www.emsl.pnnl.gov/about The Environmental Molecular Sciences Laboratory (EMSL) is a Department of Energy, Office of Science, User Facility sponsored by the Biological and Environmental Research (BER) program. At EMSL, our scientists focus on fundamental biological and environmental research...

The Sequel II System Sequencer is a high-throughput DNA sequencer machine developed and manufactured by PacBio, and is designed for high throughput, production-scale sequencing laboratories. Originally released in 2015, the Sequel system provides Single Molecule, Real-Time (SMRT) sequencing core...

The Illumina HiSeq 4000 System Sequencer is a high-throughput DNA sequencer machine developed and manufactured by Illumina, and is designed for high throughput, production-scale sequencing laboratories. Built off the HiSeq 2500 System and harnessing the patterned flow cell technology originally...

Biography Ernesto Nakayasu is a senior research scientist focused on understanding molecular mechanisms of diseases. Nakayasu has been applying systems biology and mass spectrometry-based omics measurements to study how pathogens and metabolic alterations cause human diseases; the goal is to...

PerCon SFA, Co-Investigator Vivian Lin earned her PhD in organic chemistry from the University of California, Berkeley with Professor Chris Chang, developing fluorescent probes for imaging redox active small molecules. Afterward, she traveled to Switzerland for a postdoctoral fellowship in the...

Biography Dr. Pubudu Handakumbura is the lead on the Plant and Ecosystem Phenotyping team in PNNL’s Environmental Molecular Sciences Division and the Environmental Molecular Sciences Laboratory (EMSL) user program. She has extensive experience in advanced molecular biology techniques, genetic...

Sneha Couvillion’s current research focuses on deciphering microbial metabolic activity and interactions using a combination of powerful mass-spectrometry (MS)-based omics methods (metabolomics, lipidomics, and proteomics) in a variety of environmental and human health related projects. Expertise...

Hamza is a Post Masters Research Associate at JGCRI within the Earth and Biological Sciences Directorate of PNNL. He has recently been working on the CEDS project to help develop a database of historical pollutant emissions for research and analysis. Prior to joining PNNL, Hamza completed graduate...

Smith is an Earth Scientist at PNNL whose recent research has focused on the interactions between air pollution and climate, the potential near-term role of short-lived climate forcers, and the development of comprehensive estimates of historical air pollutant emissions over the industrial era...

Andrea is a Post Masters Research Associate at PNNL. She is recently working on the CEDS project, tracking and analyzing historical anthropogenic emissions. Before joining JGCRI, she received her master's in Renewable and Clean Energy and bachelor's in Mechanical Engineering from the University of...

Agilent Analysis Platforms, Gene Expression Profiling Technologies Data Source Contributor LN Anderson (Domain Biocuration): Data curation, Writing – original draft, Writing – review & editing Instrument Data Source Profile Instrument Platform: Agilent Microarray Platform is a measurement device...

The Thermo Scientific™ Q Exactive™ GC hybrid quadrupole Orbitrap Mass Spectrometer provides an unmatched combination of sensitivity, mass-accuracy and resolving power in a single analysis for the highest confidence in compound discovery, identification, and quantitation. With best-in-class...

The Thermo Scientific LTQ Orbitrap Velos combines the proven mass accuracy and ultra-high resolution of the Orbitrap mass analyzer, with the increased sensitivity and improved cycle time of the LTQ Velos. The high mass accuracy of the LTQ Orbitrap Velos increases the speed and condense of indication...

Bruker Daltonics SolariX Magnetic Resonance Mass Spectrometry (MRMS) instruments are available for different magnetic field strengths of 7T, 12T and 15T. The SolariX XR and 2xR instruments use magnetron control technology and a newly developed, high sensitivity, low noise preamplifier to exploit...

The following R source code was used for plotting figures of the viral communities detected from three grasslands soil metagenomes with a historical precipitation gradient (WA-TmG.2.0, KS-TmG.2.0, IA-TmG.2.0) from project publication 'DNA viral diversity, abundance and functional potential vary...