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Dr. Gao obtained her Ph.D degree in Chemistry from institute of chemistry, Chinese Academy of Science. His Ph.D research focused on multiscale modeling of morphology and properties of polymeric materials, polymer processing and unveiling the process–properties relationships. (atomic to coarse...
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pmartR Software Overview The pmartR package provides a single software tool for QC (filtering and normalization), exploratory data analysis (EDA), and statistical analysis (robust to missing data) and includes numerous visualization capabilities of mass spectrometry (MS) omics data (proteomic...
Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson Snekmer: A scalable pipeline for protein sequence fingerprinting using amino acid recoding (AAR) Snekmer is a software package designed to reduce the representation of protein sequences by combining amino acid reduction (AAR) with the kmer...
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Biography Kelly is a senior data scientist in the Computational Biology group within the Biological Sciences Division at Pacific Northwest National Laboratory (PNNL). After earning a MS in Biostatistics from the University of Washington in 2012, she worked at a cancer research company for two years...
David Degnan is a biological data scientist who develops bioinformatic and statistical pipelines for multi-omics data, specifically the fields of proteomics, metabolomics, and multi-omics (phenotypic) data integration. He has experience with top-down & bottom-up proteomics analysis, genomics &...
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The year 2014 solution files are based on model calibration effort based on inputs and data from Year 2014 as described in Khangaonkar et al. 2018). It includes water surface elevation, currents, temperature and salinity at an hourly interval. These netcdf files with 24 hourly records include...
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The year 2014 solution files are based on model calibration effort based on inputs and data from Year 2014 as described in Khangaonkar et al. 2018). It includes water surface elevation, currents, temperature and salinity at an hourly interval. These netcdf files with 24 hourly records include...
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ProxyTSPRD profiles are collected using NVIDIA Nsight Systems version 2020.3.2.6-87e152c and capture computational patterns from training deep learning-based time-series proxy-applications on four different levels: models (Long short-term Memory and Convolutional Neural Network), DL frameworks...
Please cite as : McClure R.S., Y. Farris, R.E. Danczak, W.C. Nelson, H. Song, A. Kessler, and J. Lee, et al. 2022. Metatranscriptomic data from MSC-2. [Data Set] PNNL DataHub. https://data.pnnl.gov/group/nodes/dataset/33232 Metatranscriptomic data from MSC-2 12 fastq files (6 forward read, 6 reverse...
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Inclusion levels of alternative splicing (AS) events of five different varieties (i.e. skipped exon (SE), retained intron (RI), alternative 5’ splice site (A5SS), alternative 3’ splice site (A3SS), and mutually exclusive exons (MXE)) were measured in human blood samples from two separate cohorts of...
This dataset presents land surface parameters designed explicitly for global kilometer-scale Earth system modeling and has significant implications for enhancing our understanding of water, carbon, and energy cycles in the context of global change. Specifically, it includes four categories of...