WA-TmG.1.0 (Metagenome, WA)

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Description

To enable a comprehensive survey of the metabolic potential of complex soil microbiomes, we performed ultra-deep metagenome sequencing, collecting >1 terabase of sequence data from grassland soils representing different precipitation regimes. Soil sample collections representing an arid regime soil (irrigated agriculture), were collected from Washington State University’s Irrigated Agriculture Research and Extension Center (IAREC).

 

Metagenomics sequencing of material recovered from environmental soil samples to provide insight into biodiversity and function of associated environmental data. The versions described in this paper are the first version. Dataset download contains raw read sequencing files, assembly files, functional annotation files, a field site collection plot map, MIMS.me.soil.5.0 metadata information, and a dataset “Read Me” file.

Data Package Resource Files:

WA-TmG.1.0 Read Me

WA-TmG.1.0 MIMS Soil 5.0

WA-TmG.1.0 OSTI Record (.JSON)

Items below available from Download Button:

WA-TmG.1.0 Plot Map

WA-TmG.1.0 Functional Annotations [1.6 GB; 3 items]

WA-TmG.1.0 Assembly [30.1 GB; 6 items]

WA-TmG.1.0 Raw Reads [642.3 GB; 8 items]

 

English
Projects (1)
PNNL Soil Microbiome SFA
Publications (1)
Terabase Metagenome Sequencing of Grassland Soil Microbiomes
People (2)

Lindsey Anderson’s research has been dedicated to the identification and characterization of novel, targeted and non-targeted, functional metabolic interactions using a high-throughput systems biology and computational biology approach. Her expertise in functional metabolism and multidisciplinary...

Dr. Jason McDermott, senior research scientist, has extensive research experience in molecular and structural virology and data resource design, data integration and prediction of biological networks, bridging experimental and computational biology. Currently, his research interests include data...

Data Sources (1)