Christine H Chang, William C Nelson, Abby Jerger, Aaron T Wright, Robert G Egbert, Jason E McDermott, Snekmer: a scalable pipeline for protein sequence fingerprinting based on amino acid recoding, Bioinformatics Advances , Volume 3, Issue 1, 2023, vbad005, https://doi.org/10.1093/bioadv/vbad005...
Filter results
Category
- (-) Computational Research (4)
- (-) Chemical & Biological Signatures Science (1)
- Scientific Discovery (19)
- Biology (18)
- Earth System Science (7)
- Integrative Omics (7)
- Microbiome Science (4)
- Chemistry (3)
- Human Health (3)
- Computational Mathematics & Statistics (1)
- Ecosystem Science (1)
- National Security (1)
- Plant Science (1)
- Weapons of Mass Effect (1)
Content type
Tags
- (-) Functional Annotation Analysis (2)
- (-) Data Analysis (1)
- (-) Mass Spectrometry (1)
- (-) TMT (1)
- Type 1 Diabetes (6)
- Autoimmunity (5)
- Machine Learning (5)
- Biomarkers (4)
- Molecular Profiling (4)
- Mass spectrometry-based Omics (3)
- Predictive Modeling (3)
- Software Data Analysis (3)
- Alternative Splicing (2)
- DNA Sequence Analysis (2)
- Kmers (2)
- Omics (2)
- Proteomics (2)
- Python (2)
- RNA Sequence Analysis (2)
- Snakemake (2)
- EBC (1)
- Exhaled Breath Condensate (1)
- Fish Detection (1)
- High-Performance Computing (1)
- Hydropower (1)
- Marine and Hydrokinetic (1)
- Output Databases (1)
- Quantification (1)
- Statistics (1)
- underwater video (1)
pmartR Software Overview The pmartR package provides a single software tool for QC (filtering and normalization), exploratory data analysis (EDA), and statistical analysis (robust to missing data) and includes numerous visualization capabilities of mass spectrometry (MS) omics data (proteomic...
Fusarium sp. DS682 Proteogenomics Statistical Data Analysis of SFA dataset download: 10.25584/KSOmicsFspDS682/1766303 . GitHub Repository Source: https://github.com/lmbramer/Fusarium-sp.-DS-682-Proteogenomics MaxQuant Export Files (txt) Trelliscope Boxplots (jsonp) Fusarium Report (.Rmd, html)...
Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson Snekmer: A scalable pipeline for protein sequence fingerprinting using amino acid recoding (AAR) Snekmer is a software package designed to reduce the representation of protein sequences by combining amino acid reduction (AAR) with the kmer...
Biomedical Resilience & Readiness in Adverse Operating Environments (BRAVE) Project: Exhaled Breath Condensate (EBC) TMT Proteomic Transformation Data Exhaled breath condensate (EBC) represents a low-cost and non-invasive means of examining respiratory health. EBC has been used to discover and...