Christine H Chang, William C Nelson, Abby Jerger, Aaron T Wright, Robert G Egbert, Jason E McDermott, Snekmer: a scalable pipeline for protein sequence fingerprinting based on amino acid recoding, Bioinformatics Advances , Volume 3, Issue 1, 2023, vbad005, https://doi.org/10.1093/bioadv/vbad005...
Filter results
Category
- (-) Computational Research (6)
- (-) National Security (2)
- Scientific Discovery (35)
- Biology (33)
- Earth System Science (25)
- Human Health (10)
- Integrative Omics (10)
- Microbiome Science (9)
- Data Analytics & Machine Learning (3)
- Chemical & Biological Signatures Science (1)
- Chemistry (1)
- Computational Mathematics & Statistics (1)
- Computing & Analytics (1)
- Data Analytics & Machine Learning (1)
- Ecosystem Science (1)
- Materials Science (1)
- Plant Science (1)
- Weapons of Mass Effect (1)
Content type
Tags
- (-) Predictive Modeling (4)
- (-) Software Data Analysis (3)
- (-) Omics (2)
- Machine Learning (6)
- Type 1 Diabetes (6)
- Autoimmunity (5)
- Synthetic (5)
- Biomarkers (4)
- Molecular Profiling (4)
- Mass spectrometry-based Omics (3)
- Alternative Splicing (2)
- Cybersecurity (2)
- DNA Sequence Analysis (2)
- Electrical energy (2)
- Functional Annotation Analysis (2)
- Kmers (2)
- Proteomics (2)
- Python (2)
- RNA Sequence Analysis (2)
- Snakemake (2)
- EBC (1)
- Exhaled Breath Condensate (1)
- High-Performance Computing (1)
- Marine and Hydrokinetic (1)
- Mass Spectrometry (1)
- Output Databases (1)
- Quantification (1)
- Statistics (1)
- TMT (1)
- underwater video (1)
HDF5 file containing 10,000 hydraulic transmissivity inputs and the corresponding hydraulic pressure field outputs for a two-dimensional saturated flow model of the Hanford Site. The inputs are generated by sampling a 1,000-dimensional Kosambi-Karhunen-Loève (KKL) model of the transmissivity field...
The Human Islet Research Network (HIRN) is a large consortia with many research projects focused on understanding how beta cells are lost in type 1 diabetics (T1D) with a goal of finding how to protect against or replace the loss of functional beta cells. The consortia has multiple branches of...
Datasets
0
pmartR Software Overview The pmartR package provides a single software tool for QC (filtering and normalization), exploratory data analysis (EDA), and statistical analysis (robust to missing data) and includes numerous visualization capabilities of mass spectrometry (MS) omics data (proteomic...
Datasets
1
Machine learning is a core technology that is rapidly advancing within type 1 diabetes (T1D) research. Our Human Islet Research Network (HIRN) grant is studying early cellular response initiating β cell stress in T1D through the generation of heterogenous low- and high-throughput molecular...
Datasets
3
Biography Kelly is a senior data scientist in the Computational Biology group within the Biological Sciences Division at Pacific Northwest National Laboratory (PNNL). After earning a MS in Biostatistics from the University of Washington in 2012, she worked at a cancer research company for two years...
Inclusion levels of alternative splicing (AS) events of five different varieties (i.e. skipped exon (SE), retained intron (RI), alternative 5’ splice site (A5SS), alternative 3’ splice site (A3SS), and mutually exclusive exons (MXE)) were measured in human blood samples from two separate cohorts of...