EyeSea software is available at https://github.com/pnnl/EyeSea

Many important application data streams can be modeled as a complex graph of entities, where each graph node or entity is associated with a multi-variate time-series. The overall system’s behavior is modeled as a dynamical system, and it evolves through structural changes in the graph, and/or...

Emissions of anthropogenic aerosol and precursor compounds substantially alter the Earth’s radiative balance, change the oxidation capacity of the atmosphere, alter cloud processes and precipitation amounts, and result in significant impacts on human health and ecosystems. One of the primary tools...

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The Human Islet Research Network (HIRN) is a large consortia with many research projects focused on understanding how beta cells are lost in type 1 diabetics (T1D) with a goal of finding how to protect against or replace the loss of functional beta cells. The consortia has multiple branches of...

LIQUID Software Overview LIQUID provides users with the capability to process high throughput data and contains a customizable target library and scoring model per project needs. The graphical user interface provides visualization of multiple lines of spectral evidence for each lipid identification...

pmartR Software Overview The pmartR package provides a single software tool for QC (filtering and normalization), exploratory data analysis (EDA), and statistical analysis (robust to missing data) and includes numerous visualization capabilities of mass spectrometry (MS) omics data (proteomic...

Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson Snekmer: A scalable pipeline for protein sequence fingerprinting using amino acid recoding (AAR) Snekmer is a software package designed to reduce the representation of protein sequences by combining amino acid reduction (AAR) with the kmer...

GridLAB-D™ is an open source project to develop the next generation power system simulation technology. It was initiated in 2004 by the US Department of Energy's Office of Electricity Delivery and Energy Reliability at the Pacific Northwest National Laboratory , and has been continued since in...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson PNNL DataHub NIAID Program Project: Modeling Host Responses to Understand Severe Human Virus Infections, Multi-Omic Viral Dataset Catalog Collection Background The National Institute of Allergy and Infectious Diseases (NIAID) "Modeling Host...

OSU-PNNL Superfund Research Program Center is part of the Superfund Research Program (SRP) at Oregon State University, directed by Dr. Robyn Tanguay, bringing together a multidisciplinary team of experts with extensive experience in polycyclic aromatic hydrocarbons (PAHs) research. Using state-of...

The VAST Contest is a participation category of the IEEE VAST Annual Symposium. It continues in the footsteps of the VAST 2006 contest as its purpose is to promote the development of benchmark data sets and metrics for visual analytics, and to establish a forum to advance visual analytics evaluation...

This project will focus on developing, evaluating, and using a range of modeling tools to systematically analyze coastal processes, stressors, responses, and uncertainties, with an emphasis on: Interactions across different parts of coastal systems; Long-term changes in the coastal environment; and...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson Omics-LHV Profiling of Host Response to West Nile Virus Infection Background West Nile virus ( WNV ) belongs to the mosquito-borne Flaviviridae family and is classified as a Category A priority pathogen by the National Institute of Allergy and...