"Visualizing the Hidden Half: Plant-Microbe Interactions in the Rhizosphere" Plant roots and the associated rhizosphere constitute a dynamic environment that fosters numerous intra- and interkingdom interactions, including metabolite exchange between plants and soil mediated by root exudates and the...
Filter results
Category
- Scientific Discovery (19)
- Biology (18)
- Integrative Omics (8)
- Computing & Analytics (6)
- Earth System Science (6)
- Human Health (6)
- National Security (6)
- Chemistry (4)
- Computational Research (4)
- Data Analytics & Machine Learning (3)
- Microbiome Science (3)
- Computational Mathematics & Statistics (1)
- Data Analytics & Machine Learning (1)
- Ecosystem Science (1)
- Plant Science (1)
Tags
- (-) Mass Spectrometry (14)
- (-) Synthetic (14)
- Virology (79)
- Immune Response (53)
- Time Sampled Measurement Datasets (50)
- Gene expression profile data (47)
- Differential Expression Analysis (46)
- Homo sapiens (34)
- Mass spectrometry data (31)
- Multi-Omics (30)
- Viruses (27)
- Omics (26)
- Health (23)
- Virus (23)
- Soil Microbiology (22)
- MERS-CoV (18)
- Mus musculus (18)
- sequencing (13)
- West Nile virus (13)
- Genomics (12)
- Ebola (11)
- Influenza A (11)
- Metagenomics (10)
- PerCon SFA (10)
- High Throughput Sequencing (9)
- Resource Metadata (9)
- Microbiome (8)
- Proteomics (8)
- Machine Learning (7)
- Microarray (7)
HDF5 file containing 10,000 hydraulic transmissivity inputs and the corresponding hydraulic pressure field outputs for a two-dimensional saturated flow model of the Hanford Site. The inputs are generated by sampling a 1,000-dimensional Kosambi-Karhunen-Loève (KKL) model of the transmissivity field...
Human infections caused by viral pathogens trigger a complex gamut of host responses that limit disease, resolve infection, generate immunity, and contribute to severe disease or death. Here, we present experimental methods and multi-omics data capture approaches representing the global host...
Category
The Human Islet Research Network (HIRN) is a large consortia with many research projects focused on understanding how beta cells are lost in type 1 diabetics (T1D) with a goal of finding how to protect against or replace the loss of functional beta cells. The consortia has multiple branches of...
Datasets
0
This data is a model of synthetic adversarial activity surrounded by noise and was funded by DARPA. The various versions include gradually more complex networks of activities.
Category
Datasets
1
The Phenotypic Response of the Soil Microbiome to Environmental Perturbations Project (Soil Microbiome SFA) at Pacific Northwest National Laboratory is a Genomic Sciences Program Science Focus Area (SFA) Project operating under the Environmental Microbiome Science Research Area. The Soil Microbiome...
Datasets
23
LIQUID Software Overview LIQUID provides users with the capability to process high throughput data and contains a customizable target library and scoring model per project needs. The graphical user interface provides visualization of multiple lines of spectral evidence for each lipid identification...
Category
pmartR Software Overview The pmartR package provides a single software tool for QC (filtering and normalization), exploratory data analysis (EDA), and statistical analysis (robust to missing data) and includes numerous visualization capabilities of mass spectrometry (MS) omics data (proteomic...
This data is a model of synthetic adversarial activity surrounded by noise and was funded by DARPA. The various versions include gradually more complex networks of activities.
Category
Datasets
1
Machine learning is a core technology that is rapidly advancing within type 1 diabetes (T1D) research. Our Human Islet Research Network (HIRN) grant is studying early cellular response initiating β cell stress in T1D through the generation of heterogenous low- and high-throughput molecular...
Datasets
3
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson PNNL DataHub NIAID Program Project: Modeling Host Responses to Understand Severe Human Virus Infections, Multi-Omic Viral Dataset Catalog Collection Background The National Institute of Allergy and Infectious Diseases (NIAID) "Modeling Host...
Category
Datasets
45
Category
Datasets
1
Category
Datasets
7
Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson PerCon SFA Project Publication Experimental Data Catalog The Persistence Control of Engineered Functions in Complex Soil Microbiomes Project (PerCon SFA) at Pacific Northwest National Laboratory ( PNNL ) is a Genomic Sciences Program...
Datasets
3
Biography Kristin Burnum-Johnson is a senior scientist and team lead of the Biomolecular Pathways team at PNNL. Burnum-Johnson earned her PhD in Biochemistry from Vanderbilt University with Professor Richard M. Caprioli and then completed a postdoctoral fellowship at PNNL with Dr. Richard D. Smith...