This dataset is a SQL version of the Department of Energy (DOE) Public Reading Room holdings. It has been publicly available for decades. The Freedom of Information Act (FOIA) requires certain kinds of documents be made available to the public for inspection and copying. The collection includes...

Last updated on 2025-08-11 by LN Anderson Activity-Based Probe Fluorescence-Activated Cell Sorting (ABP-FACS) of Soil Microbes (NR-DP0) Soil samples were incubated with either 0.2% cellobiose for three days or 0.2% xylan for nine days. Microbes were extracted from the soil matrix, incubated...

Please cite as : Naylor D.T., K.I. Naasko, M.L. Smith, S.P. Couvillion, C.D. Nicora, J.B. Trejo, and S.C. Fransen, et al. 2023. Metatranscriptomic Analysis of Soil. [Data Set] PNNL DataHub. https://doi.org/10.25584/1986545 RNA was collected from soil at different depths and after three different...

Genomic DNA was isolated from soil and rhizosphere samples using the Zymo Quick -DNA fecal/soil microbe miniprep kit (catalog no. D6010) according to the manufacturer’s instructions (Zymo Research; Irvine, CA) with the modification of eluting in 100 uL elution buffer. Sample concentrations were...

Supporting data and code uploaded to DataHub for "How do the weather regimes drive wind speed and power production at the sub-seasonal to seasonal timescales over the CONUS?" Created by Ye Liu*, Sha Feng*, Yun Qian, Berg K Larry, Huilin Huang *POC: Ye Liu, Ye.Liu@pnnl.gov Sha Feng, sfeng@pnnl.gov --...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL004 Metadata The purpose of this experiment was to evaluate the host response to MERS-CoV virus infection. Sample data was obtained from human lung adenocarcinoma cells (Calu-3) and processed for genome binding/occupancy...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL005 Metadata The purpose of this experiment was to evaluate the human host epigenetic response to MERS-CoV virus infection. Samples were obtained from human lung adenocarcinoma cells (Calu-3) and processed for...

Omics-LHV, West Nile Experiment WCN004 The purpose of this West Nile experiment was to obtain samples for omics analysis in mouse cerebral cortex neurons in response to wild-type West Nile Virus (WNV; WNV-NY99 382) and mutant WNV-E218A (WNV-NY99 382) viral infection. Overall Design: Mouse cortical...

Omics-LHV, West Nile Experiment WCD003 The purpose of this West Nile experiment was to obtain samples for omics analysis in mouse dendritic cell response to wild-type West Nile virus (WNV). Overall Design: Mouse dendritic cells (2 x 10^5) were treated with wild-type WNV and collected in parallel...

Omics-LHV, West Nile Experiment WGCN004 The purpose of this West Nile experiment was to obtain samples for omics analysis in primary mouse granule neuron cells infected with wild type West Nile virus (WNV-NY99 clone 382, WNVWT) and mutant virus (WNVE218A). Overall Design: Granule cell neurons from...

Assembly product (viral contigs and MAGs) includes the dereplicated viral contigs and the finalized MAGs Note: ADDENDUM LINK REQUIRED for full download https://g-83fdd0.1beed.03c0.data.globus.org/MG_assembly_coassemblies.tar

The raw metatranscriptome data collected along the course of metaphenome incubation were trimmed and quality controlled.

Please cite as : Wu R., M.R. Davison, W.C. Nelson, M.L. Smith, M.S. Lipton, J.K. Jansson, and R.S. McClure, et al. 2023. HiC manuscript: bulk metagenomic data_MG_raw Upload. [Data Set] PNNL DataHub. https://doi.org/10.25584/1922087 The raw bulk metagenomic data were trimmed and de-novo assembled...

Hi-C Viral Host Links: virus-host associations indicated by Hi-C sequencing were processed by Phase Genomics by folowing the protocal, https://www.biorxiv.org/content/10.1101/2021.06.14.448389v1.full

Basic Metadata Instrument ID 59534001 Instrument Name Demeter Model Project ID 595341001 Project Name Land Use Land Cover Change Release Date 2019-04-08T12:24:33 Release State released Release State Display Released Submitted 2019-04-08T19:16:43 Submitter ID 280636 Submitter Name Min Chen Internal...