Please cite as : Wu R., M.R. Davison, W.C. Nelson, M.L. Smith, M.S. Lipton, J.K. Jansson, and R.S. McClure, et al. 2023. HiC manuscript: bulk metagenomic HiC metaG Raw. [Data Set] PNNL DataHub. https://data.pnnl.gov/group/nodes/dataset/33511 The raw Hi-C metagenomic data were trimmed and aligned to...
Filter results
Category
- Scientific Discovery (367)
- Biology (256)
- Earth System Science (161)
- Human Health (112)
- Integrative Omics (72)
- Microbiome Science (47)
- National Security (31)
- Computational Research (25)
- Computing & Analytics (17)
- Chemical & Biological Signatures Science (12)
- Weapons of Mass Effect (12)
- Energy Resiliency (11)
- Chemistry (10)
- Data Analytics & Machine Learning (9)
- Computational Mathematics & Statistics (7)
- Materials Science (7)
- Atmospheric Science (6)
- Data Analytics & Machine Learning (6)
- Visual Analytics (6)
- Renewable Energy (5)
- Coastal Science (4)
- Ecosystem Science (4)
- Plant Science (3)
- Bioenergy Technologies (2)
- Cybersecurity (2)
- Distribution (2)
- Electric Grid Modernization (2)
- Energy Efficiency (2)
- Energy Storage (2)
- Grid Cybersecurity (2)
- Solar Energy (2)
- Transportation (2)
- Computational Mathematics & Statistics (1)
- Grid Analytics (1)
- High-Performance Computing (1)
- Subsurface Science (1)
- Terrestrial Aquatics (1)
- Wind Energy (1)
Tags
- Virology (77)
- Immune Response (51)
- Time Sampled Measurement Datasets (51)
- Differential Expression Analysis (46)
- Gene expression profile data (45)
- Homo sapiens (42)
- Mass spectrometry data (32)
- Multi-Omics (32)
- Predictive Phenomics (32)
- Viruses (28)
- Omics (26)
- Soil Microbiology (24)
- Health (23)
- Mass Spectrometry (23)
- Virus (23)
- MERS-CoV (19)
- Mus musculus (18)
- Proteomics (16)
- Synthetic (14)
- Genomics (13)
- sequencing (13)
- West Nile virus (13)
- High Throughput Sequencing (11)
- Influenza A (11)
- TA2 (11)
- Metagenomics (10)
- PerCon SFA (10)
- Ebola (9)
- TA1 (9)
- Microbiome (8)
Please cite as : Naasko K.I., D.T. Naylor, E.B. Graham, S.P. Couvillion, R.E. Danczak, N. Tolic, and C.D. Nicora, et al. 2023. Influence of soil depth, moisture, and plants on multi-omic features and carbon chemistry in a calcareous soil: Summary Data. [Data Set] PNNL DataHub. https://doi.org/10...
Please cite as : Naasko K.I., D.T. Naylor, E.B. Graham, S.P. Couvillion, R.E. Danczak, N. Tolic, and C.D. Nicora, et al. 2023. Influence of soil depth, moisture, and plants on multi-omic features and carbon chemistry in a calcareous soil: Sequence Data. [Data Set] PNNL DataHub. https://doi.org/10...
Inclusion levels of alternative splicing (AS) events of five different varieties (i.e. skipped exon (SE), retained intron (RI), alternative 5’ splice site (A5SS), alternative 3’ splice site (A3SS), and mutually exclusive exons (MXE)) were measured in human blood samples from two separate cohorts of...
CO2 Capture CFD (C3FD) dataset contains STAR-CCM+ simulations of a CO2-capturing solvent flowing across packing structures in a column. This dataset contains two parts. First part of the data consists of 50 2D and 50 3D simulations, each of which spans 500 timesteps. Each case has varying inlet...
Last updated on 2023-03-21T18:35:22+00:00 by LN Anderson SAGE-RTP RT-PCR Amplicon Sequencing Barcode Count Analysis Promoter expression data for five bacterial species associated with the Serine recombinase Assisted Genome Engineering (SAGE) research project. Raw Measurement Data NCBI BioProject...
The presentation and supporting information provide data on the performance of an engineering-scale cross-flow heat exchanger used in hydrothermal liquefaction (HTL). Temperature profiles are provide for the process of waste water treatment sludges and a food waste. The data can be used to model...
Category
This dataset is a SQL version of the Department of Energy (DOE) Public Reading Room holdings. It has been publicly available for decades. The Freedom of Information Act (FOIA) requires certain kinds of documents be made available to the public for inspection and copying. The collection includes...
Last updated on 2024-10-04T19:31:35+00:00 by LN Anderson Activity-Based Probe Fluorescence-Activated Cell Sorting (ABP-FACS) of Soil Microbes (NR-DP0) Soil samples were incubated with either 0.2% cellobiose for three days or 0.2% xylan for nine days. Microbes were extracted from the soil matrix...
Category
Genomic DNA was isolated from soil and rhizosphere samples using the Zymo Quick -DNA fecal/soil microbe miniprep kit (catalog no. D6010) according to the manufacturer’s instructions (Zymo Research; Irvine, CA) with the modification of eluting in 100 uL elution buffer. Sample concentrations were...
Please cite as : Naylor D.T., K.I. Naasko, M.L. Smith, S.P. Couvillion, C.D. Nicora, J.B. Trejo, and S.C. Fransen, et al. 2023. Metatranscriptomic Analysis of Soil. [Data Set] PNNL DataHub. https://doi.org/10.25584/1986545 RNA was collected from soil at different depths and after three different...
Supporting data and code uploaded to DataHub for "How do the weather regimes drive wind speed and power production at the sub-seasonal to seasonal timescales over the CONUS?" Created by Ye Liu*, Sha Feng*, Yun Qian, Berg K Larry, Huilin Huang *POC: Ye Liu, Ye.Liu@pnnl.gov Sha Feng, sfeng@pnnl.gov --...
Category
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL004 Metadata The purpose of this experiment was to evaluate the host response to MERS-CoV virus infection. Sample data was obtained from human lung adenocarcinoma cells (Calu-3) and processed for genome binding/occupancy...
Category
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL005 Metadata The purpose of this experiment was to evaluate the human host epigenetic response to MERS-CoV virus infection. Samples were obtained from human lung adenocarcinoma cells (Calu-3) and processed for...
Category
Omics-LHV, West Nile Experiment WGCN004 The purpose of this West Nile experiment was to obtain samples for omics analysis in primary mouse granule neuron cells infected with wild type West Nile virus (WNV-NY99 clone 382, WNVWT) and mutant virus (WNVE218A). Overall Design: Granule cell neurons from...