Pending Review Microbiomes contribute to multiple ecosystem services by transforming organic matter in soil. Extreme shifts in the environment, such as drying-rewetting cycles during drought, can impact microbial metabolism of organic matter by altering their physiology and function. These...
Filter results
Content type
Tags
- (-) Machine Learning (1)
- (-) Relative Transcriptional Profiling (1)
- (-) Soil Microbiology (1)
- PerCon SFA (5)
- RNA Sequence Analysis (3)
- Synthetic Biology (3)
- High Throughput Sequencing (2)
- Sorghum bicolor (2)
- Amplicon Sequencing (1)
- Assisted Genome Engineering (1)
- Data Visualization (1)
- DNA Sequence Analysis (1)
- Fish Detection (1)
- Functional Annotation Analysis (1)
- Hydropower (1)
- Imaging (1)
- Kmers (1)
- Lipidomics (1)
- Marine and Hydrokinetic (1)
- Mass Spectrometry (1)
- metabolomics (1)
- Omics (1)
- Python (1)
- Snakemake (1)
- Software Data Analysis (1)
- Spectroscopy (1)
- Statistical Expression Analysis (1)
- Tomography (1)
- underwater video (1)
- Whole Genome Sequencing (1)
Showing 1 - 3 of 3
Elmore JR, Dexter GN, Baldino H, Huenemann JD, Francis R, Peabody GL 5th, Martinez-Baird J, Riley LA, Simmons T, Coleman-Derr D, Guss AM, Egbert RG. High-throughput genetic engineering of nonmodel and undomesticated bacteria via iterative site-specific genome integration. Sci Adv. 2023 Mar 10;9(10)...
Publication
A major challenge in biotechnology and biomanufacturing is the identification of a set of biomarkers for perturbations and metabolites of interest. Here, we develop a data-driven, transcriptome-wide approach to rank perturbation-inducible genes from time-series RNA sequencing data for the discovery...