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Showing 1 - 11 of 11
Publication
Defined synthetic microbial communities colonize and benefit field-grown sorghum (pre-print)

The rhizosphere represents a dynamic and complex interface between plant hosts and the microbial community found in the surrounding soil. While it is recognized that manipulating the rhizosphere has the potential to improve plant fitness and health, engineering the rhizosphere microbiome through...

Scientific Discovery
Biology
Microbiome Science
Earth System Science
Publication
A novel phenylpropanoid methyl esterase enables catabolism of aromatic compounds that inhibit biological nitrification (pre-print)

Agriculture is the largest source of greenhouse gases (GHG) production. Conversion of nitrogen fertilizers into more reduced forms by microbes through a process known as biological nitrification drives GHG production, enhances proliferation of toxic algal blooms, and increases cost of crop...

Scientific Discovery
Biology
Microbiome Science
Earth System Science
Project
Synthetic Data and Graph Generation for Modeling Adversarial Activity - IvySys

This data is a model of synthetic adversarial activity surrounded by noise and was funded by DARPA. The various versions include gradually more complex networks of activities.

Computing & Analytics

  1. Datasets

    1
Project
Persistence Control of Engineered Functions in Complex Soil Microbiomes (PerCon SFA), Secure Biosystems Design Project

Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson PerCon SFA Project Publication Experimental Data Catalog The Persistence Control of Engineered Functions in Complex Soil Microbiomes Project (PerCon SFA) at Pacific Northwest National Laboratory ( PNNL ) is a Genomic Sciences Program...

Scientific Discovery
Biology
Microbiome Science
Earth System Science

  1. Datasets

    3
Project
VAST Challenge 2019: Disaster at St. Himark!
The VAST Challenge 2019 presents three mini-challenges and a grand challenge for you to apply your visual analytics research and technologies to help a city grapple with the aftermath of an earthquake that damages their nuclear power plant. These challenges are open to participation by individuals...
Computing & Analytics

  1. Datasets

    1
Project
Synthetic Data and Graph Generation for Modeling Adversarial Activity - PNNL
This data is a model of synthetic adversarial activity surrounded by noise and was funded by DARPA. The various versions include gradually more complex networks of activities. This data was generated by PNNL. Activities can be phone calls, transactions, or any other type of communications. Most of...
Computing & Analytics

  1. Datasets

    7
Project
Synthetic Data and Graph Generation for Modeling Adversarial Activity - GORDIAN

This data is a model of synthetic adversarial activity surrounded by noise and was funded by DARPA. The various versions include gradually more complex networks of activities.

Computing & Analytics

  1. Datasets

    1
Dataset
IvySys Synthetic Data

This data was generated by the organization IvySys. Activities can be phone calls, transactions, or any other type of communications. Most of the files are of the type .edges, .rdf, or .csv; but all can be opened in a text editor. A good introduction to this data can be found in \Tutorial1\MAA...

Computing & Analytics
Dataset
WA-TmG.1.0 (Metagenome, WA)

Please cite as : Anderson L.N., W.C. Nelson, J.E. McDermott, R. Wu, S.J. Fansler, Y. Farris, and J.K. Jansson, et al. 2020. WA-TmG.1.0 (Metagenome, WA). [Data Set] PNNL DataHub. https://doi.org/10.25584/WATmG1/1635002 To enable a comprehensive survey of the metabolic potential of complex soil...

Biology
Earth System Science
Dataset
WA-IsoC_NAG.1.0 (Amplicon 16S/ITS, WA)
Please cite as : Zegeye E., C.J. Brislawn, Y. Farris, S.J. Fansler, K.S. Hofmockel, J.K. Jansson, and A.T. Wright, et al. 2019. WA-IsoC_NAG.1.0 (Amplicon 16S/ITS, WA). [Data Set] PNNL DataHub. https://dx.doi.org/10.25584/data.2019-02.700/1506698 Investigation of the successional dynamics of a soil...
Biology
Earth System Science
Dataset
WA-TmG.2.0 (Metagenome, WA)

Please cite as : Anderson L.N., R. Wu, W.C. Nelson, J.E. McDermott, K.S. Hofmockel, and J.K. Jansson. 2021. WA-TmG.2.0 (Metagenome, WA). [Data Set] PNNL DataHub. https://doi.org/10.25584/WATmG2/1770324​​​​​​​ Soil samples were collected in triplicate in the fall of 2017 across the three grassland...

Biology
Earth System Science