"Visualizing the Hidden Half: Plant-Microbe Interactions in the Rhizosphere" Plant roots and the associated rhizosphere constitute a dynamic environment that fosters numerous intra- and interkingdom interactions, including metabolite exchange between plants and soil mediated by root exudates and the...
Filter results
Content type
Tags
- (-) metabolomics (2)
- (-) RNA Sequence Analysis (2)
- Omics (10)
- PerCon SFA (10)
- High Throughput Sequencing (8)
- Genomics (7)
- Mass Spectrometry (6)
- Synthetic Biology (6)
- Sequencer System (5)
- Proteomics (3)
- A. pittii SO1 (2)
- Amplicon Sequencing (2)
- Biological and Environmental Research (2)
- Imaging (2)
- Long Read Sequencer (2)
- Mass Spectrometer (2)
- Mass spectrometry data (2)
- Sorghum bicolor (2)
- Spectroscopy (2)
- Statistical Expression Analysis (2)
- Whole Genome Sequencing (2)
- Data Analysis (1)
- DOE (1)
- Environmental Microbiome Science (1)
- Genomic Sciences Program (1)
- Lipidomics (1)
- Machine Learning (1)
- Output Databases (1)
- Soil Microbiology (1)
- ToF-SIMS (1)
Pending Review Microbiomes contribute to multiple ecosystem services by transforming organic matter in soil. Extreme shifts in the environment, such as drying-rewetting cycles during drought, can impact microbial metabolism of organic matter by altering their physiology and function. These...
Metabolite exchange between plant roots and their associated rhizosphere microbiomes underpins plant growth promotion by microbes. Sorghum bicolor is a cereal crop that feeds animals and humans and is used for bioethanol production. Its root tips exude large amounts of a lipophilic benzoquinone...
A major challenge in biotechnology and biomanufacturing is the identification of a set of biomarkers for perturbations and metabolites of interest. Here, we develop a data-driven, transcriptome-wide approach to rank perturbation-inducible genes from time-series RNA sequencing data for the discovery...
Biography Young-Mo Kim is a senior bioanalytical chemist at PNNL. He received his PhD from Pohang University of Science and Technology in the School of Environmental Science and Engineering, studying analysis of metabolites during the bacterial and fungal degradation of xenobiotic substrates using...