The Sequel II System Sequencer is a high-throughput DNA sequencer machine developed and manufactured by PacBio , and is designed for high throughput, production-scale sequencing laboratories. Originally released in 2015, the Sequel system provides Single Molecule, Real-Time (SMRT) sequencing core...
Filter results
Category
- (-) Biology (37)
- (-) Chemistry (2)
- (-) Solar Energy (1)
- Scientific Discovery (49)
- Earth System Science (22)
- Human Health (21)
- Integrative Omics (16)
- Computational Research (11)
- Microbiome Science (9)
- National Security (6)
- Computing & Analytics (5)
- Data Analytics & Machine Learning (5)
- Energy Resiliency (3)
- Computational Mathematics & Statistics (2)
- Materials Science (2)
- Renewable Energy (2)
- Chemical & Biological Signatures Science (1)
- Coastal Science (1)
- Data Analytics & Machine Learning (1)
- Ecosystem Science (1)
- Energy Efficiency (1)
- Energy Storage (1)
- Weapons of Mass Effect (1)
Software Type
Tags
- Omics (17)
- Genomics (6)
- High Throughput Sequencing (6)
- Mass spectrometry data (6)
- Omics-LHV Project (6)
- Virology (6)
- Differential Expression Analysis (5)
- Gene expression profile data (5)
- Imaging (5)
- Immune Response (5)
- Mass Spectrometer (5)
- Mass Spectrometry (5)
- Multi-Omics (5)
- Sequencer System (5)
- Time Sampled Measurement Datasets (5)
- Autoimmunity (4)
- Biomarkers (4)
- Homo sapiens (4)
- Molecular Profiling (4)
- Proteomics (4)
- Type 1 Diabetes (4)
- Machine Learning (3)
- Mass spectrometry-based Omics (3)
- Microscopy (3)
- Mus musculus (3)
- Biological and Environmental Research (2)
- Ebola (2)
- Lipidomics (2)
- metabolomics (2)
- Spectroscopy (2)
The Human Islet Research Network (HIRN) is a large consortia with many research projects focused on understanding how beta cells are lost in type 1 diabetics (T1D) with a goal of finding how to protect against or replace the loss of functional beta cells. The consortia has multiple branches of...
Datasets
0
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson Omics-LHV Profiling of Host Interferon-Stimulated Response to Virus Infection Background The human host Interferon ( IFN ) alpha, beta, and gamma participate in the body's natural immune response to lethal virus infection and disease. The...
Category
Datasets
5
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson Omics-LHV Profiling of Host Response to MERS-CoV Virus Infection Background Middle East Respiratory Syndrome coronavirus ( MERS-CoV ), part of the Coronaviridae family, is classified as a Category C priority pathogen by the National Institute...
Category
Datasets
15
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson Omics-LHV Profiling of Host Response to Ebola Virus Infection Background Ebola virus ( EBOV ) is a high risk biological agent, belonging to the Flaviviridae family, and is classified as a Category A priority pathogen by the National Institute...
Category
Datasets
6
The Phenotypic Response of the Soil Microbiome to Environmental Perturbations Project (Soil Microbiome SFA) at Pacific Northwest National Laboratory is a Genomic Sciences Program Science Focus Area (SFA) Project operating under the Environmental Microbiome Science Research Area. The Soil Microbiome...
Datasets
23
LIQUID Software Overview LIQUID provides users with the capability to process high throughput data and contains a customizable target library and scoring model per project needs. The graphical user interface provides visualization of multiple lines of spectral evidence for each lipid identification...
Category
pmartR Software Overview The pmartR package provides a single software tool for QC (filtering and normalization), exploratory data analysis (EDA), and statistical analysis (robust to missing data) and includes numerous visualization capabilities of mass spectrometry (MS) omics data (proteomic...
Category
Datasets
1
Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson Snekmer: A scalable pipeline for protein sequence fingerprinting using amino acid recoding (AAR) Snekmer is a software package designed to reduce the representation of protein sequences by combining amino acid reduction (AAR) with the kmer...
The PNNL-SERDP database was constructed by PNNL to generate the quantitative infrared spectra of gases associated with biomass burning; the reference data are to allow detection and quantification of such gases via infrared absorption spectroscopy. Candidates for the database were selected based on...
Category
Datasets
2
Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson PerCon SFA Project Publication Experimental Data Catalog The Persistence Control of Engineered Functions in Complex Soil Microbiomes Project (PerCon SFA) at Pacific Northwest National Laboratory ( PNNL ) is a Genomic Sciences Program...
Datasets
3
The Environmental Determinants of Diabetes in the Young (TEDDY) study is searching for factors influencing the development of type 1 diabetes (T1D) in children. Research has shown that there are certain genes that correlate to higher risk of developing T1D, but not all children with these genes...
Datasets
1
The Diabetes Autoimmunity Study in the Young (DAISY) seeks to find environmental factors that can trigger the development of type 1 diabetes (T1D) in children. DAISY follows children with high-risk of developing T1D based on family history or genetic markers. Genes, diets, infections, and...
Datasets
1
OSU-PNNL Superfund Research Program Center is part of the Superfund Research Program (SRP) at Oregon State University, directed by Dr. Robyn Tanguay, bringing together a multidisciplinary team of experts with extensive experience in polycyclic aromatic hydrocarbons (PAHs) research. Using state-of...
Category
Datasets
3