LIQUID Software Overview LIQUID provides users with the capability to process high throughput data and contains a customizable target library and scoring model per project needs. The graphical user interface provides visualization of multiple lines of spectral evidence for each lipid identification...

pmartR Software Overview The pmartR package provides a single software tool for QC (filtering and normalization), exploratory data analysis (EDA), and statistical analysis (robust to missing data) and includes numerous visualization capabilities of mass spectrometry (MS) omics data (proteomic...

The following R source code was used for plotting figures of the viral communities detected from three grasslands soil metagenomes with a historical precipitation gradient ( WA-TmG.2.0 , KS-TmG.2.0 , IA-TmG.2.0 ) from project publication 'DNA viral diversity, abundance and functional potential vary...

Fusarium sp. DS682 Proteogenomics Statistical Data Analysis of SFA dataset download: 10.25584/KSOmicsFspDS682/1766303 . GitHub Repository Source: https://github.com/lmbramer/Fusarium-sp.-DS-682-Proteogenomics MaxQuant Export Files (txt) Trelliscope Boxplots (jsonp) Fusarium Report (.Rmd, html)...

Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson Snekmer: A scalable pipeline for protein sequence fingerprinting using amino acid recoding (AAR) Snekmer is a software package designed to reduce the representation of protein sequences by combining amino acid reduction (AAR) with the kmer...

GridLAB-D™ is an open source project to develop the next generation power system simulation technology. It was initiated in 2004 by the US Department of Energy's Office of Electricity Delivery and Energy Reliability at the Pacific Northwest National Laboratory , and has been continued since in...

PNNL Publications 2020 Smith J.N., K.J. Tyrrell, J.P. Smith, J.P. Smith, K.K. Weitz, and W.D. Faber. 2020. "Linking Internal Dosimetries of the Propyl Metabolic Series in Rats and Humans Using Physiologically Based Pharmacokinetic (PBPK) Modeling." Regulatory Toxicology and Pharmacology 110. PNNL...

PNNL Publications 2020 Ogden A.J., T.W. Wietsma, T.E. Winkler, Y. Farris, G.L. Myers, and A. Ahkami. 2020. "Dynamics of Global Gene Expression and Regulatory Elements in Growing Brachypodium Root System." Scientific Reports 10. PNNL-SA-145907. doi:10.1038/s41598-020-63224-z 2019 Boiteau R.M., S.J...

Yun is a scientist at PNNL. He has been leading projects investigating the impacts of snow and ice impurities on climate and water resources. He is also interested in land-atmosphere-cloud interaction, including the impact of urbanization and irrigation. Recently he has been working on the...

Zhe is a scientist at PNNL. His recent efforts involve understanding the impact of climate change to mesoscale convective systems and extreme precipitation and using innovative methods and advanced observations to evaluate and improve the representations of convective clouds, mesoscale convective...

Dr. L. Ruby Leung is a Battelle Fellow at PNNL. Her research broadly cuts across multiple areas in modeling and analysis of climate and the hydrological cycle, including land-atmosphere interactions, orographic processes, monsoon climate, climate extremes, land surface processes, and aerosol-cloud...

Jianfeng is a Post Doctorate Associate at PNNL. He is interested in combining atmospheric chemistry and physics to explore the comprehensive impacts of atmospheric processes on air quality and climate change. His recent research is to investigate the relationship between convection and extreme...

Professor Suresh D. Pillai is the Director of the National Center for Electron Beam Research (NCEBR). He brings together researchers from across the Texas A&M University System and around the world to harness their skills to make paradigm-shifting changes in how we address contemporary food, public...

Larry is involved in all aspects of Steri-Tek’s business, technical, and sales-side of the company. His cross-functional management background and extensive knowledge and experience in radiation sterilization, and its various applications, has enabled Steri-Tek to become a leader in the industry...

Dr. Jason McDermott, senior research scientist, has extensive research experience in molecular and structural virology and data resource design, data integration and prediction of biological networks, bridging experimental and computational biology. Currently, his research interests include data...