Dataset Description The purpose of this experiment was to evaluate the regulatory stress response of Oleaginous yeast species Rhodotorula toruloides NBRC 0880 (JGI strain IFFO0880 v4.0) under nitrogen-rich and nitrogen-limited conditions over time. Time course experimental samples (24, 48, and 72...
Created 2024-12-20T23:47:47+00:00 by LN Anderson ; Last updated 2025-05-09T15:55:34+00:00 S. elongatus PCC 7942 Circadian Control Bioproduction Metabolomics (PB-DP5) The purpose of this experiment was to evaluate how circadian clock regulation impacts carbon partitioning between storage, growth, and...
Created 2024-12-20T23:47:47+00:00 by LN Anderson ; Last updated 2025-05-09T15:55:34+00:00 S. elongatus PCC 7942 Circadian Control Bioproduction Transcriptomics (PB-DP3) The purpose of this experiment was to evaluate how circadian clock regulation impacts carbon partitioning between storage, growth...
This data has been submitted to the RSCB Protein Data Bank (PDB) under accession code 7TVO (V-Csn-E157Q).
This data has been submitted to the RSCB Protein Data Bank (PDB) under accession code 7TVP (V-Csn-E157Q chitohexaose complex).
Original data available on MassIVE under accession number MSV000086931 . Paper tentative title: Drought and wet-up causes significant remodeling of the soil lipidome Author list: Sneha Couvillion et al. We used lipidomics to capture the rapid metabolic response of the microbial community in an arid...
This data has been submitted to the RSCB Protein Data Bank (PDB) under accession code 7TVO (V-Csn-E157Q).
This data has been submitted to the RSCB Protein Data Bank (PDB) under accession code 7TVL (V-Csn apo1).
This data has been deposited at the Sequence Read Archive (SRA) SRP400851 under the BioProject accession: PRJNA886747 .
This data has been submitted to the RSCB Protein Data Bank (PDB) under accession code 7TVN (V-Csn-D148N).
This repository contains data for the experiments run in the paper "Understanding Generative AI Content with Embedding Models" ( https://arxiv.org/abs/2408.10437 ). DataBase POC: Max Vargas (max.vargas@pnnl.gov) The data is separated by experiment: A. The `stack_exchange` dataset contains a...
Please cite as : RodrĂguez-Ramos, JosuĂ©, Natalie Sadler, Elias K. Zegeye, Yuliya Farris, Samuel Purvine, Sneha Couvillion, William C. Nelson, and Kirsten Hofmockel. Environmental matrix and moisture are key determinants of microbial phenotypes expressed in a reduced complexity soil-analog. 2024....
Original data published and available from Zenodo at: https://doi.org/10.5281/zenodo.13839485 Please cite as : Zimmerman, A., & Hofmockel, K. (2024). Global terrestrial carbon pools and fluxes [Data set]. In Global Change Biology. Zenodo. https://doi.org/10.5281/zenodo.13839485 This file contains a...
Please cite as : Nicholas J Reichart, Sheryl Bell, Vanessa A. Garayburu-Caruso, Natalie Sadler, Sharon Zhao, Kirsten Hofmockel. Chitin Decomposition 16S rRNA gene fastq. 2024 . [Data Set] PNNL DataHub. 10.25584/2475041. This data is published under a CC0 license . The authors encourage data reuse...
Dataset Description The purpose of this experiment was to evaluate the human host cellular response to wild type human coronavirus strain 229E (HCoV-229E) infection. Sample data was obtained for mock-infected and HCoV-229E infected immortalized human lung epithelial cells (A549) (MOI 5) and...
