Last updated on 2023-05-31T16:35:53+00:00 by LN Anderson PerCon SFA: Profiling sorghum-microbe interactions with a specialized photoaffinity probe identifies key sorgoleone binders in Acinetobacter pitti Mass spectrometry data analysis of SoDA-PAL photoaffinity probe labeled proteins and global...

Last updated on 2023-05-31T16:35:53+00:00 by LN Anderson PerCon SFA: Sequencing of Sorgoleone Promoting Rhizobacteria Isolates Whole genome sequencing (WGS) of sorgoleone utilizing rhizobacteria strains Pseudomonas sorgoleonovorans SO81 , Burkholderia anthina SO82 , and Acinetobacter pittii SO1 , as...

The raw Hi-C metagenomic data were trimmed and aligned to the de-novo assemblies obtained from the paired shotgun metagenomes following the Hi-C kit manufacturer's recommendations ( https://phasegenomics.github.io/2019/09/19/hic-alignment-and-qc.html). The contig-contig links or Hi-C links were...

This file was created by Bill Nelson GENERAL INFORMATION 1. Title of Dataset: Depth and moisture effects on soil chemistry and microbiome composition 2020 Naasko 2. Contributors: Principal Investigator: Kirsten Hofmockel Data contributor (creator, producer, etc): Katherine Naasko 3. Information...

This file was created by Katherine Naasko (and edited by Bill Nelson) GENERAL INFORMATION 1. Title of Dataset: Depth and moisture effects on soil chemistry and microbiome composition 2020 Naasko 2. Contributors: Principal Investigator: Kirsten Hofmockel Data contributor (creator, producer, etc)...

Inclusion levels of alternative splicing (AS) events of five different varieties (i.e. skipped exon (SE), retained intron (RI), alternative 5’ splice site (A5SS), alternative 3’ splice site (A3SS), and mutually exclusive exons (MXE)) were measured in human blood samples from two separate cohorts of...

CO2 Capture CFD (C3FD) dataset contains STAR-CCM+ simulations of a CO2-capturing solvent flowing across packing structures in a column. This dataset contains 50 2D and 50 3D simulations, each of which spans 500 timesteps. The 2D and 3D simulation meshes have 150,073 and 3,129,815 nodes, respectively...

Last updated on 2023-03-21T18:35:22+00:00 by LN Anderson SAGE-RTP RT-PCR Amplicon Sequencing Barcode Count Analysis Promoter expression data for five bacterial species associated with the Serine recombinase Assisted Genome Engineering (SAGE) research project. Raw Measurement Data BioProject...

The presentation and supporting information provide data on the performance of an engineering-scale cross-flow heat exchanger used in hydrothermal liquefaction (HTL). Temperature profiles are provide for the process of waste water treatment sludges and a food waste. The data can be used to model...

This dataset is a SQL version of the Department of Energy (DOE) Public Reading Room holdings. It has been publicly available for decades. The Freedom of Information Act (FOIA) requires certain kinds of documents be made available to the public for inspection and copying. The collection includes...

16S amplicon fastq files to be associated with PhenoSelection manuscript.

RNA was collected from soil at different depths and after three different levels of irrigation T1 100% of normal field irrigation, T4: 18.75% or normal irrigation and T5: unirrigated controls. Total RNA was isolated using the Zymo Quick-RNA fecal/soil microbe miniprep (catalog no. R2040)...

Genomic DNA was isolated from soil and rhizosphere samples using the Zymo Quick -DNA fecal/soil microbe miniprep kit (catalog no. D6010) according to the manufacturer’s instructions (Zymo Research; Irvine, CA) with the modification of eluting in 100 uL elution buffer. Sample concentrations were...

Supporting data and code uploaded to DataHub for "How do the weather regimes drive wind speed and power production at the sub-seasonal to seasonal timescales over the CONUS?" Created by Ye Liu*, Sha Feng*, Yun Qian, Berg K Larry, Huilin Huang *POC: Ye Liu, Ye.Liu@pnnl.gov Sha Feng, sfeng@pnnl.gov --...

Last updated on 2023-01-30T00:09:57+00:00 by LN Anderson MERS-CoV Experiment MCL005 Metadata The purpose of this experiment was to evaluate the human host epigenetic response to MERS-CoV virus infection. Samples were obtained from human lung adenocarcinoma cells (Calu-3) and processed for...