Data Sample
Description
Last updated on 2023-05-31T16:35:53+00:00 by LN Anderson
PerCon SFA: Sequencing of Sorgoleone Promoting Rhizobacteria Isolates
Whole genome sequencing (WGS) of sorgoleone utilizing rhizobacteria strains Pseudomonas sorgoleonovorans SO81, Burkholderia anthina SO82, and Acinetobacter pittii SO1, as potential plant growth promoting microbes (PGPM), derived from Sorghum bicolor rhizosphere soil extracts.
Raw Measurement Data
BioProject Collection: PRJNA878512
1. BioSample: SAMN31055413
- Sample Name: Burkholderia anthina SO82
- Taxon ID: 179879
- Locus Tag: OH687
- Sequence Read Archive: SRS15313270
- GenBank Assembly: GCA_030374675.1
2. BioSample: SAMN31055412
- Sample Name: Pseudomonas sorgoleonovorans SO81
- Taxon ID: 2983246
- Locus Tag: OH686
- Sequence Read Archive: SRS15313269
- GenBank Assembly: GCA_030374125.1
3. BioSample: SAMN31055411
- Sample Name: Acinetobacter pittii SO1
- Taxon ID: 48296
- Locus Tag: OH685
- Sequence Read Archive: SRS15313268
- GenBank Assembly: GCF_029987435.1
Reference Citation
- Genomic Science Program (GSP) Biosystems Design Project: Persistence Control of Engineered Functions in Complex Soil Microbiomes. PerCon SFA: Sorgoleone Microbial Specie Isolate Genome Sequencing Collection, Persistence Control SFA: Whole Genome Sequencing of Sorgoleone Promoting Rhizobacteria Isolates. 2022/09. In: BioProject [Internet]. Bethesda, MD: National Library of Medicine (US), National Center for Biotechnology Information; 2011-. Available from: http://www.ncbi.nlm.nih.gov/bioproject/PRJNA878512. NCBI:BioProject: PRJNA878512.
Funding Acknowledgments
The provided material is based upon work supported by the U.S. Department of Energy, Office of Biological and Environmental Research, Genomic Science Program and is a contribution of the Pacific Northwest National Laboratory Persistence Control of Engineered Functions in Complex Soil Microbiomes project (https://doi.org/10.25584/1969551). Pacific Northwest National Laboratory is a multiprogram national laboratory managed by the Battelle Memorial Institute Battelle Memorial Institute, operating under the U.S. Department of Energy Contract DE-AC05-76RL01830.
Data Reuse Citation Policy
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Data Licensing
CC BY-SA 4.0 (processed datasets), CC0 1.0 PNNL DataHub policy default for metadata)