Created 2025-06-03T23:16:59+00:00 by LN Anderson Integrative SP3 Workflow for Multi-PTM Proteomics Profiling (PPI-TZ-DP0) The purpose of this experiment was to evaluate a new standardized method approach for proteomics sample processing designed to facilitate multiplexed quantification of protein...

Created on 2025-06-10T00:34:54+00:00 by LN Anderson

Created on 2024-10-16T17:27:40+00:00 by LN Anderson and is pending updates.

Created on 2024-10-15T19:55:00+00:00 by LN Anderson ; Last updated 2024-11-13T15:01:44+00:00 and is pending public release before or by 2025-10-01. Human Liver Epithelium Response to HCoV-229E Infection Epigenomics (ACS-DP4) The purpose of this experiment was to evaluate how wild-type Human...

Created on 2024-10-15T19:55:00+00:00 by LN Anderson ; Last updated 2024-11-13T15:01:44+00:00 and is pending public release before or by 2025-10-01. Human Primary Airway Epithelium Response to HCoV-229E Infection Transcriptomics (ACS-DP3) The purpose of this experiment was to evaluate the human host...

Created on updated 2024-10-01T21:34:23+00:00 by LN Anderson ; Last updated 2024-11-13T15:01:44+00:00 and is pending public release. Human Host Cellular Response to HCoV-229E Infection Proteomics (ACS-JM-DP2) The purpose of this experiment was to evaluate the human host cellular response to wild-type...

Created 2024-09-17T19:19:38+00:00 by LN Anderson ; Last updated 2024-10-17T17:30:32+00:00 and is pending public release. Human A549 and MRC5 Cell Response to HCoV-229E Infection Transcriptomics (ACS-DP1) The purpose of this experiment was to evaluate the human host cellular response to wild-type...

Last updated on 2025-01-31T00:37:40+00:00 by LN Anderson High-density Lipoprotein (HDL) Structure and Function (JM-DP1) The purpose of this experiment was to investigate how the interactions between APOA1 and APOA2 on the surface of high-density lipoproteins (HDL) impact particle function...

Comprised of 6,426 sample runs, The Environmental Determinants of Diabetes in the Young (TEDDY) proteomics validation study constitutes one of the largest targeted proteomics studies in the literature to date. Making quality control (QC) and donor sample data available to researchers aligns with...

This data is supplementary to the manuscript Expanding the access of wearable silicone wristbands in community-engaged research through best practices in data analysis and integration by Lisa M. Bramer, Holly M. Dixon, David J. Degnan, Diana Rohlman, Julie B. Herbstman, Kim A. Anderson, and Katrina...

A total of 172 children from the DAISY study with multiple plasma samples collected over time, with up to 23 years of follow-up, were characterized via proteomics analysis. Of the children there were 40 controls and 132 cases. All 132 cases had measurements across time relative to IA. Sampling was...

Inclusion levels of alternative splicing (AS) events of five different varieties (i.e. skipped exon (SE), retained intron (RI), alternative 5’ splice site (A5SS), alternative 3’ splice site (A3SS), and mutually exclusive exons (MXE)) were measured in human blood samples from two separate cohorts of...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL004 Metadata The purpose of this experiment was to evaluate the host response to MERS-CoV virus infection. Sample data was obtained from human lung adenocarcinoma cells (Calu-3) and processed for genome binding/occupancy...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL005 Metadata The purpose of this experiment was to evaluate the human host epigenetic response to MERS-CoV virus infection. Samples were obtained from human lung adenocarcinoma cells (Calu-3) and processed for...

Omics-LHV, West Nile Experiment WGCN004 The purpose of this West Nile experiment was to obtain samples for omics analysis in primary mouse granule neuron cells infected with wild type West Nile virus (WNV-NY99 clone 382, WNVWT) and mutant virus (WNVE218A). Overall Design: Granule cell neurons from...