This data package consists of RNA-seq data from human islets (n=10) treated with IFNγ + IL-1β for 24 h ( Table S1 ). Data contributors: Wenting Wu & Carmella Evans-Molina: Center for Diabetes and Metabolic Diseases, Indiana University School of Medicine, Indianapolis, IN, USA. Farooq Syed: Center...

This data package consists of mouse MIN6 cells treated with IL-1β + IFNγ + TNFα for 0 min, 15 min, 2 hr, and 24 hr, alongside an untreated 24 hr control, and submitted to global and PTM proteomics (carbamylation and acetylation) analysis (n=3) ( Table S1 ). This was designed to characterize the...

This data package consists of data from paired human islets treated with IFNγ + IL-1β for 48 h and submitted to RNA-seq (n=5), ATAC-seq (n=5), UMI-4C18 (n=2 or 3, depending on the viewpoint), and ChIP-seq for histone H3 lysine 27 acetylation (H3K27Ac) (n=4) ( Table S1 ). Islets across the study...

This data package consists of data from human islets (n=8) treated with IFNγ + IL-1β for 24 h and submitted to phosphoproteomics ( Table S1 ). Data contributor: Wei-Jun Qian: Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA. Data repository: PXD011857...

This data package consists of data from human islets (n=6) treated with IFNγ + IL-1β for 24 h and subjected to top-down proteomics ( Table S1 ). Data contributors: Ashley N. Ives, Wei-Jun Qian & James M. Fulcher: Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA...

The data package consists of RNA-seq data from human islet-derived exosomes post IFNγ + IL-1β treatment of human islets (n=5) for 24 h ( Table S1 ). Data contributors: Preethi Krishnan& Carmella Evans-Molina: Department of Diabetes Immunology, Beckman Research Institute, City of Hope, Duarte, CA...

This data package consists of data from parallel experiments compared to Pck001 but performed with EndoC-βH1 cells instead of human islets. Cells were treated with IFNγ + IL-1β for 48 h and submitted to RNA-seq (n=5), ATAC-seq (n=5), DNA methylation (n=5), and H3K27Ac ChIP-seq (n=4). In addition...

This data package contains processed LC-MS proteomics results and analysis scripts associated with the paper "Assessment of Protein Inference Methods for Metaproteomics". In this study, we designed an artificial microbial community to create a simulated metaproteomic dataset which intentionally...

Please cite as : Authors. Year. PNNL MCPC Characterization Round 2. [Data Set] PNNL DataHub. DOI This data is published under a CC0 license . The authors encourage data reuse and request attribution by referencing the above citations for the data package. Principal Researcher: Dr. Erin Barker...

Please cite as : Authors. Year. PNNL MCPC Characterization Round 1. [Data Set] PNNL DataHub. DOI This data is published under a CC0 license . The authors encourage data reuse and request attribution by referencing the above citations for the data package. Principal Researcher: Dr. Erin Barker...

Friction Stir Welding Processing Friction Stir Welding (FSW) is a solid-phase joining process achieved by spinning a tool and plunging it into the weld site. Frictional heating and material deformation enable the formation of a plasticized region below the tool shoulder called the stir-zone. The FSW...

Please cite as : Authors. Year. PNNL MCPC Characterization Round 3. [Data Set] PNNL DataHub. DOI This data is published under a CC0 license . The authors encourage data reuse and request attribution by referencing the above citations for the data package. Principal Researcher: Dr. Erin Barker...

Dataset Description The goal of the experiment was to demonstrate that the optimized multiplexed multi-PTM profiling workflow can comprehensively and quantitatively capture dynamic changes in protein abundance, cysteine oxidation, phosphorylation, and acetylation in cytokine-induced inflammatory...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL005 Metadata The purpose of this experiment was to evaluate the human host epigenetic response to MERS-CoV virus infection. Samples were obtained from human lung adenocarcinoma cells (Calu-3) and processed for...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL004 Metadata The purpose of this experiment was to evaluate the host response to MERS-CoV virus infection. Sample data was obtained from human lung adenocarcinoma cells (Calu-3) and processed for genome binding/occupancy...