This data package consists of data from human islets (n=8) treated with IFNγ + IL-1β for 24 h and submitted to phosphoproteomics ( Table 1 ). Data contributor: Wei-Jun Qian: Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA. Data repository: PXD011857...

The data package consists of RNA-seq data from human islet-derived exosomes post IFNγ + IL-1β treatment of human islets (n=5) for 24 h ( Table 1 ). Data contributors: Preethi Krishnan& Carmella Evans-Molina: Department of Diabetes Immunology, Beckman Research Institute, City of Hope, Duarte, CA, USA...

This data package consists of data from parallel experiments compared to Pck001 but performed with EndoC-βH1 cells instead of human islets. Cells were treated with IFNγ + IL-1β for 48 h and submitted to RNA-seq (n=5), ATAC-seq (n=5), DNA methylation (n=5), and H3K27Ac ChIP-seq (n=4). In addition...

This data package consists of data from human islets (n=6) treated with IFNγ + IL-1β for 24 h and submitted to top-down proteomics ( Table 1 ). Data contributors: Ashley Ives, Wei-Jun Qian & James Fulcher: Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA...

This data package consists of data from sets of β-TC-3 cells (n=3) treated with IL-1β + IFNγ + TNFα for 24 h with or without ML351 and submitted to RNA-seq ( Table 1 ). ML351 is an inhibitor of 12-lipoxygenase, an enzyme that produces 12-HETE. Therefore, this treatment was done to study whether...

This data package consists of data from β-TC-6 cells treated with IFNγ + IL-1β for 4, 8 or 24 h (n=4) and submitted to enrichment of cysteine-containing peptides (redox), phosphopeptides and acetylated peptides. This enabled the analysis of proteomics, redox cysteine, phosphoproteomics and...

This data package contains processed LC-MS proteomics results and analysis scripts associated with the paper "Assessing Degenerate Peptide Resolution Methods using a Ground Truth Dataset". In this study, we designed an artificial microbial community to create a ground truth, simulated metaproteomic...

Please cite as : Authors. Year. PNNL MCPC Characterization Round 2. [Data Set] PNNL DataHub. DOI This data is published under a CC0 license . The authors encourage data reuse and request attribution by referencing the above citations for the data package. Principal Researcher: Dr. Erin Barker...

Friction Stir Welding Processing Friction Stir Welding (FSW) is a solid-phase joining process achieved by spinning a tool and plunging it into the weld site. Frictional heating and material deformation enable the formation of a plasticized region below the tool shoulder called the stir-zone. The FSW...

Please cite as : Authors. Year. PNNL MCPC Characterization Round 3. [Data Set] PNNL DataHub. DOI This data is published under a CC0 license . The authors encourage data reuse and request attribution by referencing the above citations for the data package. Principal Researcher: Dr. Erin Barker...

Please cite as : Authors. Year. PNNL MCPC Characterization Round 1. [Data Set] PNNL DataHub. DOI This data is published under a CC0 license . The authors encourage data reuse and request attribution by referencing the above citations for the data package. Principal Researcher: Dr. Erin Barker...

Created 2025-06-03T23:16:59+00:00 by LN Anderson .Currently pending DOI assignment for public release. Integrative SP3 Workflow for Multi-PTM Proteomics Profiling (PPI-TZ-DP0) The purpose of this experiment was to evaluate a new standardized method approach for proteomics sample processing designed...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL005 Metadata The purpose of this experiment was to evaluate the human host epigenetic response to MERS-CoV virus infection. Samples were obtained from human lung adenocarcinoma cells (Calu-3) and processed for...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL004 Metadata The purpose of this experiment was to evaluate the host response to MERS-CoV virus infection. Sample data was obtained from human lung adenocarcinoma cells (Calu-3) and processed for genome binding/occupancy...

Omics-LHV, West Nile Experiment WGCN004 The purpose of this West Nile experiment was to obtain samples for omics analysis in primary mouse granule neuron cells infected with wild type West Nile virus (WNV-NY99 clone 382, WNVWT) and mutant virus (WNVE218A). Overall Design: Granule cell neurons from...