This repository contains data and code for the experiments run in the paper "Understanding Generative AI Content with Embedding Models" ( https://arxiv.org/abs/2408.10437 ). DataBase POC: Max Vargas (max.vargas@pnnl.gov) The data is separated by experiment: A. The `stack_exchange` dataset contains a...
Please cite as : JosuĂ© A. RodrĂguez-Ramos, Amy E. Zimmerman, Ruonan Wu, Sheryl Bell, Trinidad Alfaro, Kirsten Hofmockel, William C. Nelson. 2025. Inter-Kingdom Viral Interactions. [Data Set] PNNL DataHub. https://doi.org/10.25584/2583337 This data is published under a CC0 license . The authors...
Please cite as : Robert E. Danczak, Sheryl Bell, Evan Warburton, Trinidad Alfaro, Kirsten Hofmockel, Amy E. Zimmerman, William C. Nelson, 2025. Prokaryotic and eukaryotic interactions along a moisture gradient . [Data Set] PNNL DataHub. https://doi.org/10.25584/2574929 This data is published under a...
Created 2025-06-03T23:16:59+00:00 by LN Anderson Integrative SP3 Workflow for Multi-PTM Proteomics Profiling (PPI-TZ-DP0) The purpose of this experiment was to evaluate a new standardized method approach for proteomics sample processing designed to facilitate multiplexed quantification of protein...
Data package for Lipids represent a dynamic, yet stable pool of microbially-derived soil carbon This data is published under a CC0 license . The authors encourage data reuse and request attribution by referencing the below citations for the data packages and associated manuscript. Please cite as...
Please cite as : McClure, R. and Janet Jansson. 2025. EVT 16s Data and Large Supplementary Files . [Data Set] PNNL DataHub. https://doi.org/10.25584/2530740. This data is published under a CC0 license . The authors encourage data reuse and request attribution by referencing the above citations for...
Created 2024-12-22T20:31:04+00:00 by LN Anderson ; Last updated 2025-02-04T20:14:18+00:00 and is pending public release. Rhodotorula toruloides Nitrogen Limitation PTM Profiling Multi-Omics (TZ-DP1) The purpose of this experiment was to evaluate the regulatory stress response of Oleaginous yeast...
Created 2024-12-20T23:47:47+00:00 by LN Anderson ; Last updated 2025-05-09T15:55:34+00:00 S. elongatus PCC 7942 Circadian Control Bioproduction Metabolomics (PB-DP5) The purpose of this experiment was to evaluate how circadian clock regulation impacts carbon partitioning between storage, growth, and...
Created 2024-12-20T23:47:47+00:00 by LN Anderson ; Last updated 2025-05-09T15:55:34+00:00 S. elongatus PCC 7942 Circadian Control Bioproduction Transcriptomics (PB-DP3) The purpose of this experiment was to evaluate how circadian clock regulation impacts carbon partitioning between storage, growth...
This data has been submitted to the RSCB Protein Data Bank (PDB) under accession code 7TVP (V-Csn-E157Q chitohexaose complex).
This data has been submitted to the RSCB Protein Data Bank (PDB) under accession code 7TVO (V-Csn-E157Q).
This data has been submitted to the RSCB Protein Data Bank (PDB) under accession code 7TVO (V-Csn-E157Q).
This data has been submitted to the RSCB Protein Data Bank (PDB) under accession code 7TVN (V-Csn-D148N).
This data has been deposited at the Sequence Read Archive (SRA) SRP400851 under the BioProject accession: PRJNA886747 .
Original data available on MassIVE under accession number MSV000086931 . Paper tentative title: Drought and wet-up causes significant remodeling of the soil lipidome Author list: Sneha Couvillion et al. We used lipidomics to capture the rapid metabolic response of the microbial community in an arid...
