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Biography Ernesto Nakayasu is a senior research scientist focused on understanding molecular mechanisms of diseases. Nakayasu has been applying systems biology and mass spectrometry-based omics measurements to study how pathogens and metabolic alterations cause human diseases; the goal is to...

The Thermo Scientific LTQ Orbitrap Velos combines the proven mass accuracy and ultra-high resolution of the Orbitrap mass analyzer, with the increased sensitivity and improved cycle time of the LTQ Velos. The high mass accuracy of the LTQ Orbitrap Velos increases the speed and condense of indication...

The IONTOF TOF.SIMS 5 data source is a time-of-flight secondary ion mass spectrometer and powerful surface analysis tool used to investigate scientific questions in biological, environmental, and energy research. Among the most sensitive of surface analysis tools, it uses a high-vacuum technique...

LIQUID Software Overview LIQUID provides users with the capability to process high throughput data and contains a customizable target library and scoring model per project needs. The graphical user interface provides visualization of multiple lines of spectral evidence for each lipid identification...

PerCon SFA Project Data Catalog Collection (uploads pending) The Persistence Control of Engineered Functions in Complex Soil Microbiomes Project (PerCon SFA), at Pacific Northwest National Laboratory (PNNL), is a Genomic Sciences Program Biosystems Design Research Science Focus Area project. The...

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"Visualizing the Hidden Half: Plant-Microbe Interactions in the Rhizosphere" Plant roots and the associated rhizosphere constitute a dynamic environment that fosters numerous intra- and interkingdom interactions, including metabolite exchange between plants and soil mediated by root exudates and the...

Multi-Omics Extended Data Package DOI Rapid Remodeling of the Soil Lipidome in Response to a Drying-Rewetting Event This study reveals specific changes in lipids and metabolites that are indicative of stress adaptation, substrate use, and cellular recovery during soil drying and subsequent rewetting...

MPLEx Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses Mass Spectrometry Experimental Protocol (SIO:001043) | Standard Operating Procedure (SIO:000964) The Metabolite, Protein and Lipid Extraction (MPLEx) method protocol is a robust and applicable...

KS4A-Omics1.0_FspDS68 Fungal Monoisolate Multi-Omics Data Package DOI "Fungal Mineral Weathering Mechanisms Revealed Through Direct Molecular Visualization" Soil fungi facilitate the translocation of inorganic nutrients from soil minerals to other microorganisms and plants. This ability is...

The Phenotypic Response of the Soil Microbiome to Environmental Perturbations Project (Soil Microbiome) at Pacific Northwest National Laboratory is a Genomic Sciences Program Science Focus Area (SFA) Project operating under the Environmental Microbiome Science Research Area. The Soil Microbiome SFA...

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