Pending Review Microbiomes contribute to multiple ecosystem services by transforming organic matter in soil. Extreme shifts in the environment, such as drying-rewetting cycles during drought, can impact microbial metabolism of organic matter by altering their physiology and function. These...
Filter results
Category
- (-) Microbiome Science (5)
- Scientific Discovery (15)
- Biology (14)
- Computational Research (6)
- Earth System Science (6)
- Data Analytics & Machine Learning (5)
- Human Health (5)
- Integrative Omics (3)
- Computational Mathematics & Statistics (2)
- Chemistry (1)
- Computational Mathematics & Statistics (1)
- Computing & Analytics (1)
- Data Analytics & Machine Learning (1)
- National Security (1)
Content type
Tags
- (-) Amplicon Sequencing (2)
- (-) DOE (1)
- (-) Machine Learning (1)
- (-) metabolomics (1)
- (-) Output Databases (1)
- Omics (9)
- PerCon SFA (9)
- High Throughput Sequencing (8)
- Genomics (7)
- Sequencer System (5)
- Synthetic Biology (5)
- Mass Spectrometry (3)
- A. pittii SO1 (2)
- Biological and Environmental Research (2)
- Imaging (2)
- Long Read Sequencer (2)
- Mass spectrometry data (2)
- Proteomics (2)
- RNA Sequence Analysis (2)
- Sorghum bicolor (2)
- Spectroscopy (2)
- Statistical Expression Analysis (2)
- Whole Genome Sequencing (2)
- Data Analysis (1)
- Environmental Microbiome Science (1)
- Genomic Sciences Program (1)
- Lipidomics (1)
- Mass Spectrometer (1)
- Science Focus Area Project (1)
- Soil Microbiology (1)
A major challenge in biotechnology and biomanufacturing is the identification of a set of biomarkers for perturbations and metabolites of interest. Here, we develop a data-driven, transcriptome-wide approach to rank perturbation-inducible genes from time-series RNA sequencing data for the discovery...
The Phenotypic Response of the Soil Microbiome to Environmental Perturbations Project (Soil Microbiome SFA) at Pacific Northwest National Laboratory is a Genomic Sciences Program Science Focus Area (SFA) Project operating under the Environmental Microbiome Science Research Area. The Soil Microbiome...
Datasets
23
Fusarium sp. DS682 Proteogenomics Statistical Data Analysis of SFA dataset download: 10.25584/KSOmicsFspDS682/1766303 . GitHub Repository Source: https://github.com/lmbramer/Fusarium-sp.-DS-682-Proteogenomics MaxQuant Export Files (txt) Trelliscope Boxplots (jsonp) Fusarium Report (.Rmd, html)...
Last updated on 2023-03-21T18:35:22+00:00 by LN Anderson SAGE-RTP RT-PCR Amplicon Sequencing Barcode Count Analysis Promoter expression data for five bacterial species associated with the Serine recombinase Assisted Genome Engineering (SAGE) research project. Raw Measurement Data NCBI BioProject...