Pending Review Microbiomes contribute to multiple ecosystem services by transforming organic matter in soil. Extreme shifts in the environment, such as drying-rewetting cycles during drought, can impact microbial metabolism of organic matter by altering their physiology and function. These...
Filter results
Content type
Tags
- (-) RNA Sequence Analysis (4)
- (-) Lipidomics (3)
- Omics (18)
- Viruses (11)
- Soil Microbiology (9)
- Health (8)
- Virology (8)
- Virus (8)
- Genomics (7)
- High Throughput Sequencing (7)
- Imaging (5)
- Mass Spectrometer (5)
- Mass Spectrometry (5)
- PerCon SFA (5)
- Sequencer System (5)
- Ions (4)
- Microbiome (4)
- Nanoparticles (4)
- sequencing (4)
- Spectroscopy (4)
- Electrical energy (3)
- Energy (3)
- Fungi (3)
- metabolomics (3)
- Metagenomics (3)
- Microscopy (3)
- Proteomics (3)
- Sodium (3)
- Software Data Analysis (3)
- Synthetic Biology (3)
Christine H Chang, William C Nelson, Abby Jerger, Aaron T Wright, Robert G Egbert, Jason E McDermott, Snekmer: a scalable pipeline for protein sequence fingerprinting based on amino acid recoding, Bioinformatics Advances , Volume 3, Issue 1, 2023, vbad005, https://doi.org/10.1093/bioadv/vbad005...
Metabolite exchange between plant roots and their associated rhizosphere microbiomes underpins plant growth promotion by microbes. Sorghum bicolor is a cereal crop that feeds animals and humans and is used for bioethanol production. Its root tips exude large amounts of a lipophilic benzoquinone...
A major challenge in biotechnology and biomanufacturing is the identification of a set of biomarkers for perturbations and metabolites of interest. Here, we develop a data-driven, transcriptome-wide approach to rank perturbation-inducible genes from time-series RNA sequencing data for the discovery...
LIQUID Software Overview LIQUID provides users with the capability to process high throughput data and contains a customizable target library and scoring model per project needs. The graphical user interface provides visualization of multiple lines of spectral evidence for each lipid identification...
Category
Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson Snekmer: A scalable pipeline for protein sequence fingerprinting using amino acid recoding (AAR) Snekmer is a software package designed to reduce the representation of protein sequences by combining amino acid reduction (AAR) with the kmer...
Last updated on 2024-03-03T02:26:52+00:00 by LN Anderson The Thermo Scientific™ Velos Pro™ Orbitrap Mass Spectrometer instrument data source combines advanced mass accuracy with an ultra-high resolution Orbitrap mass analyzer for increased sensitivity, enabling molecular weight determination for...