David Degnan is a biological data scientist who develops bioinformatic and statistical pipelines for multi-omics data, specifically the fields of proteomics, metabolomics, and multi-omics (phenotypic) data integration. He has experience with top-down & bottom-up proteomics analysis, genomics &...
Filter results
Category
- (-) Integrative Omics (74)
- (-) Chemistry (10)
- (-) Computational Mathematics & Statistics (7)
- (-) Weapons of Mass Effect (5)
- (-) Coastal Science (4)
- Scientific Discovery (309)
- Biology (200)
- Earth System Science (136)
- Human Health (104)
- Microbiome Science (42)
- Computational Research (25)
- National Security (22)
- Computing & Analytics (15)
- Energy Resiliency (10)
- Data Analytics & Machine Learning (9)
- Materials Science (7)
- Visual Analytics (6)
- Chemical & Biological Signatures Science (5)
- Renewable Energy (5)
- Atmospheric Science (4)
- Data Analytics & Machine Learning (4)
- Ecosystem Science (4)
- Plant Science (3)
- Cybersecurity (2)
- Distribution (2)
- Electric Grid Modernization (2)
- Energy Efficiency (2)
- Energy Storage (2)
- Grid Cybersecurity (2)
- Solar Energy (2)
- Bioenergy Technologies (1)
- Computational Mathematics & Statistics (1)
- Grid Analytics (1)
- High-Performance Computing (1)
- Subsurface Science (1)
- Terrestrial Aquatics (1)
- Transportation (1)
- Wind Energy (1)
Tags
- Virology (57)
- Immune Response (53)
- Time Sampled Measurement Datasets (50)
- Gene expression profile data (47)
- Differential Expression Analysis (46)
- Homo sapiens (34)
- Mass spectrometry data (30)
- Multi-Omics (30)
- MERS-CoV (18)
- Mus musculus (18)
- West Nile virus (13)
- Ebola (11)
- Influenza A (11)
- Omics (10)
- Resource Metadata (9)
- Mass Spectrometry (8)
- Proteomics (7)
- Human Interferon (6)
- Microarray (6)
- Omics-LHV Project (6)
- Mass Spectrometer (5)
- Imaging (3)
- metabolomics (3)
- Microscopy (3)
- Response to type I interferon (3)
- Epigenetics (2)
- Lethal Human Viruses (2)
- Lipidomics (2)
- Processed Data (2)
- Viral Experiment (2)
Last updated on 2024-03-03T02:26:52+00:00 by LN Anderson The Thermo Scientific™ Q Exactive™ Plus Mass Spectrometer benchtop LC-MS/MS system combines quadruple precursor ion selection with high-resolution, accurate-mass (HRAM) Orbitrap detection to deliver exceptional performance and versatility...
Last updated on 2024-03-03T02:26:52+00:00 by LN Anderson The Thermo Scientific™ Velos Pro™ Orbitrap Mass Spectrometer instrument data source combines advanced mass accuracy with an ultra-high resolution Orbitrap mass analyzer for increased sensitivity, enabling molecular weight determination for...
Bruker Daltonics SolariX Magnetic Resonance Mass Spectrometry (MRMS) instruments are available for different magnetic field strengths of 7T, 12T and 15T. The SolariX XR and 2xR instruments use magnetron control technology and a newly developed, high sensitivity, low noise preamplifier to exploit...
Category
The IONTOF TOF.SIMS 5 data source is a time-of-flight secondary ion mass spectrometer and powerful surface analysis tool used to investigate scientific questions in biological, environmental, and energy research. Among the most sensitive of surface analysis tools, it uses a high-vacuum technique...
The Nikon Eclipse Ti2-E is a motorized and intelligent model for advanced imaging applications. Compatible with PFS, auto correction collar, and external phase contrast system. The base of choice for live-cell imaging, high-content applications, confocal and super-resolution.As research trends...
Category
The innovative Elstar™ electron column forms the basis of the Helios NanoLab’s outstanding high resolution imaging performance. The Elstar features unique technologies, such as constant power lenses for higher thermal stability, electrostatic scanning for faster, higher accurate imaging, and unique...
Category
The Thermo Scientific™ Q Exactive™ GC hybrid quadrupole Orbitrap Mass Spectrometer provides an unmatched combination of sensitivity, mass-accuracy and resolving power in a single analysis for the highest confidence in compound discovery, identification, and quantitation. With best-in-class...
Category
Last updated on 2023-04-24T18:38:03+00:00 by LN Anderson Instrument Data Source Profile Instrument Name: Agilent DNA Microarray Scanner Model: G25025C Data Type: Microarray hybridisation data (mRNA, miRNA) Method Taxon: Expression profiling by array, Non-coding RNA profiling by array Topic Areas...
Last updated on 2024-03-21T18:47:20+00:00 by LN Anderson MPLEx Method Protocol for Integrative Single-Sample Processing for Subsequent Proteomic, Metabolomic, and Lipidomic Analyses Method Source Contributions LN Anderson , Data Curation The Metabolite, Protein and Lipid Extraction (MPLEx) method...
Category
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson Interferon Experiment IFNaCL001 The purpose of this experiment was to evaluate the host interferon-stimulated cellular response to interferon alpha (IFNα) treatment. Sample data was obtained from human lung adenocarcinoma cells (Calu-3)...
Category
The database contains 55 compounds and is comprised of the species in the paper referenced below that introduced the concept of the SERDP database.
Category
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson Ebola Virus Experiment EU937001 The purpose of this experiment was to evaluate the human host response to wild-type Zaire Ebola virus (strain Mayinga) and mutant virus infection. Samples were obtained from human histiocytic lymphoma cells...
Category
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson Influenza A Virus Experiment ICL102 The purpose of this experiment was to evaluate the human host cellular response to Influenza A virus (subtype H7N9) , wild-type strain Influenza A/Anhui/1/2013 (AH1-WT), and mutant viruses NS1-L103F/I106M...
Category
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson Influenza A Virus Experiment ICL103 The purpose of this experiment was to evaluate the human host response to Influenza A virus (subtype H5N1) and mutant viruses. Sample data was obtained for human lung adenocarcinoma cell line (Calu-3)...