Last updated on 2023-01-30T00:09:57+00:00 by LN Anderson Ebola Virus Experiment EIHH001 This experiment evaluated Immortalized Human Hepatocyte ( IHH ) cell line host response to wild-type Ebola viruses Zaire Ebola (ZEBOV '76) and Reston Ebola (REBOV '08) viral infection. Processed Transcriptome...
Filter results
Category
- Biology (42)
- Scientific Discovery (42)
- Human Health (25)
- Integrative Omics (17)
- Earth System Science (14)
- Microbiome Science (13)
- Computational Research (5)
- Data Analytics & Machine Learning (5)
- National Security (3)
- Chemical & Biological Signatures Science (2)
- Weapons of Mass Effect (2)
- Chemistry (1)
- Computational Mathematics & Statistics (1)
- Computational Mathematics & Statistics (1)
- Computing & Analytics (1)
- Data Analytics & Machine Learning (1)
Content type
Tags
- (-) Genomics (12)
- (-) Ebola (11)
- (-) High Throughput Sequencing (9)
- (-) Proteomics (8)
- (-) Machine Learning (7)
- Virology (79)
- Immune Response (53)
- Time Sampled Measurement Datasets (50)
- Gene expression profile data (47)
- Differential Expression Analysis (46)
- Homo sapiens (34)
- Mass spectrometry data (31)
- Multi-Omics (30)
- Viruses (26)
- Omics (25)
- Health (23)
- Virus (23)
- Soil Microbiology (21)
- MERS-CoV (18)
- Mus musculus (18)
- Mass Spectrometry (14)
- Synthetic (14)
- sequencing (13)
- West Nile virus (13)
- Influenza A (11)
- PerCon SFA (10)
- Metagenomics (9)
- Resource Metadata (9)
- Microbiome (8)
- Microarray (7)
Last updated on 2023-01-30T00:09:57+00:00 by LN Anderson Ebola Virus Experiment EIHH002 This experiment evaluated Immortalized Human Hepatocyte ( IHH ) cell line host response to response to genetically-reconstructed Zaire Ebola virus infection. Processed Transcriptome Data Unavailable
Category
Category
MERS-CoV Experiment MDC001 Processed Omics Data Unavailable This experiment evaluated primary human dendritic cells infected with a wild type MERS-CoV (icMERS) virus. Related Experimental Data BioProject: PRJNA315103 GEO: GSE79172 (mRNA transcriptome response) Acknowledgment of Federal Funding The...
Category
Viral communities detected from three large grassland soil metagenomes with historically different precipitation moisture regimes.
Category
Elmore JR, Dexter GN, Baldino H, Huenemann JD, Francis R, Peabody GL 5th, Martinez-Baird J, Riley LA, Simmons T, Coleman-Derr D, Guss AM, Egbert RG. High-throughput genetic engineering of nonmodel and undomesticated bacteria via iterative site-specific genome integration. Sci Adv. 2023 Mar 10;9(10)...
Metabolite exchange between plant roots and their associated rhizosphere microbiomes underpins plant growth promotion by microbes. Sorghum bicolor is a cereal crop that feeds animals and humans and is used for bioethanol production. Its root tips exude large amounts of a lipophilic benzoquinone...
A major challenge in biotechnology and biomanufacturing is the identification of a set of biomarkers for perturbations and metabolites of interest. Here, we develop a data-driven, transcriptome-wide approach to rank perturbation-inducible genes from time-series RNA sequencing data for the discovery...
HDF5 file containing 10,000 hydraulic transmissivity inputs and the corresponding hydraulic pressure field outputs for a two-dimensional saturated flow model of the Hanford Site. The inputs are generated by sampling a 1,000-dimensional Kosambi-Karhunen-Loève (KKL) model of the transmissivity field...
The Sequel II System Sequencer is a high-throughput DNA sequencer machine developed and manufactured by PacBio , and is designed for high throughput, production-scale sequencing laboratories. Originally released in 2015, the Sequel system provides Single Molecule, Real-Time (SMRT) sequencing core...
Human infections caused by viral pathogens trigger a complex gamut of host responses that limit disease, resolve infection, generate immunity, and contribute to severe disease or death. Here, we present experimental methods and multi-omics data capture approaches representing the global host...
Category
The Phenotypic Response of the Soil Microbiome to Environmental Perturbations Project (Soil Microbiome SFA) at Pacific Northwest National Laboratory is a Genomic Sciences Program Science Focus Area (SFA) Project operating under the Environmental Microbiome Science Research Area. The Soil Microbiome...
Datasets
23
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson Omics-LHV Profiling of Host Response to Ebola Virus Infection Background Ebola virus ( EBOV ) is a high risk biological agent, belonging to the Flaviviridae family, and is classified as a Category A priority pathogen by the National Institute...
Category
Datasets
6
Datasets
1
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson PNNL DataHub NIAID Program Project: Modeling Host Responses to Understand Severe Human Virus Infections, Multi-Omic Viral Dataset Catalog Collection Background The National Institute of Allergy and Infectious Diseases (NIAID) "Modeling Host...
Category
Datasets
45