Created 2024-12-20T23:47:47+00:00 by LN Anderson ; Last updated 2025-05-09T15:55:34+00:00 S. elongatus PCC 7942 Circadian Control Bioproduction Transcriptomics (PB-DP3) The purpose of this experiment was to evaluate how circadian clock regulation impacts carbon partitioning between storage, growth...

Created on 2024-10-15T19:55:00+00:00 by LN Anderson ; Last updated 2024-11-13T15:01:44+00:00 and is pending public release before or by 2025-10-01. Human Liver Epithelium Response to HCoV-229E Infection Epigenomics (ACS-DP4) The purpose of this experiment was to evaluate how wild-type Human...

Created on 2024-10-15T19:55:00+00:00 by LN Anderson ; Last updated 2024-11-13T15:01:44+00:00 and is pending public release before or by 2025-10-01. Human Primary Airway Epithelium Response to HCoV-229E Infection Transcriptomics (ACS-DP3) The purpose of this experiment was to evaluate the human host...

Created on updated 2024-10-01T21:34:23+00:00 by LN Anderson ; Last updated 2024-11-13T15:01:44+00:00 and is pending public release. Human Host Cellular Response to HCoV-229E Infection Proteomics (ACS-JM-DP2) The purpose of this experiment was to evaluate the human host cellular response to wild-type...

Created 2024-09-17T19:19:38+00:00 by LN Anderson ; Last updated 2024-10-17T17:30:32+00:00 and is pending public release. Human A549 and MRC5 Cell Response to HCoV-229E Infection Transcriptomics (ACS-DP1) The purpose of this experiment was to evaluate the human host cellular response to wild-type...

Inclusion levels of alternative splicing (AS) events of five different varieties (i.e. skipped exon (SE), retained intron (RI), alternative 5’ splice site (A5SS), alternative 3’ splice site (A3SS), and mutually exclusive exons (MXE)) were measured in human blood samples from two separate cohorts of...

Last updated on 2023-03-21T18:35:22+00:00 by LN Anderson SAGE-RTP RT-PCR Amplicon Sequencing Barcode Count Analysis Promoter expression data for five bacterial species associated with the Serine recombinase Assisted Genome Engineering (SAGE) research project. Raw Measurement Data NCBI BioProject...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL004 Metadata The purpose of this experiment was to evaluate the host response to MERS-CoV virus infection. Sample data was obtained from human lung adenocarcinoma cells (Calu-3) and processed for genome binding/occupancy...

Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL005 Metadata The purpose of this experiment was to evaluate the human host epigenetic response to MERS-CoV virus infection. Samples were obtained from human lung adenocarcinoma cells (Calu-3) and processed for...

Systems Virology Lethal Human Virus, SARS-CoV Experiment SHAE003 New uploads pending The purpose of this SARS experiment was to obtain samples for transcriptome analysis in Human Airway Epithelial (HAE) cells infected with SARS-CoV, SARS deltaORF6, SARS BatSRBD mutants in a longitudinal study...

Systems Virology Lethal Human Virus, SARS-CoV Experiment SHAE002 New uploads pending The purpose of this SARS experiment was to obtain samples for transcriptome analysis in Human Airway Epithelial (HAE) cells infected with SARS-CoV, SARS deltaORF6, SARS BatSRBD mutants in a longitudinal study...

Systems Virology Lethal Human Virus, SARS-CoV Experiment SCL008 New uploads pending The purpose of this SARS experiment was to obtain samples for transcriptome and proteome analysis in human lung 2B4 cells (clonal derivative of Calu-3 cells) infected with either icSARS CoV, icSARS-deltaNSP16 or...

Systems Virology Lethal Human Virus, SARS-CoV Experiment SCL006 New uploads pending The purpose of this SARS experiment was to obtain samples for transcriptome and proteome analysis in human lung 2B4 cells (clonal derivative of Calu-3 cells) infected with wild type icSARS CoV Urbani and icSARS Bat...

Systems Virology Lethal Human Virus, SARS-CoV Experiment SCL005 New uploads pending The purpose of this experiment was to evaluate the human host response to wild type virus icSARS-CoV Urbani and mutant virus icSARS deltaORF6 (DORF6) infection for subsequent transcriptional and proteomic analysis in...

Systems Virology Lethal Human Virus, SARS-CoV Experiment SM012 New uploads pending The purpose of this SARS experiment was to obtain samples for transcriptome and proteome analysis in C57Bl/6 mice infected with SARS MA15 or SARS deltaORF6 mutant viruses. Overall Design: Twenty-week-old C57BL/6 mice...