RhizoGrid Indexed Sorghum Rhizosphere Multi-Omics pending public release Identification of spatially resolved biomarkers of drought in Sorghum bicolor rhizosphere molecular-microbe interactions using a novel root cartography "RhizoGrid" system for sampling plants under drought and control conditions...
Created 2025-06-03T23:16:59+00:00 by LN Anderson .Currently pending DOI assignment for public release. Integrative SP3 Workflow for Multi-PTM Proteomics Profiling (PPI-TZ-DP0) The purpose of this experiment was to evaluate a new standardized method approach for proteomics sample processing designed...
Created 2024-12-22T20:31:04+00:00 by LN Anderson Rhodotorula toruloides Nitrogen Limitation PTM Profiling Multi-Omics (TZ-DP1) The purpose of this experiment was to evaluate the regulatory stress response of Oleaginous yeast species Rhodotorula toruloides NBRC 0880 (JGI strain IFO0880 v4.0 ) under...
Currently pending public release.
Currently pending public release.
Created on 2024-10-16T17:27:40+00:00 by LN Anderson ; Last updated 2025-08-01T15:13:46+00:00. S. elongatus PCC 7942 LiP and TPP Structural Proteomics (JM-PB-DP3) The purpose of this experiment was to investigate structural alterations in proteins involved in central carbon metabolism and...
Currently pending public release.
Last updated on 2025-01-31T00:37:40+00:00 by LN Anderson High-density Lipoprotein (HDL) Structure and Function (JM-DP1) The purpose of this experiment was to investigate how the interactions between APOA1 and APOA2 on the surface of high-density lipoproteins (HDL) impact particle function...
Rapid remodeling of the soil lipidome in response to a drying-rewetting event - Multi-Omics Data Package DOI Data package contents reported here are the first version and contain pre- and post-processed data acquisition and subsequent downstream analysis files using various data source instrument...
Last updated on 2025-01-16T22:12:33+00:00 by LN Anderson Fungal Monoisolate Multi-Omics Data Package DOI "KS4A-Omics1.0_FspDS68" Molecular mechanisms underlying fungal mineral weathering and nutrient translocation in low nutrient environments remain poorly resolved, due to the lack of a platform for...
MERS-CoV Experiment MDC001 Processed Omics Data Unavailable This experiment evaluated primary human dendritic cells infected with a wild type MERS-CoV (icMERS) virus. Related Experimental Data BioProject: PRJNA315103 GEO: GSE79172 (mRNA transcriptome response) Acknowledgment of Federal Funding The...
Coronaviruses (CoV) emerge suddenly from animal reservoirs to cause novel diseases in new hosts. Discovered in 2012, the Middle East respiratory syndrome coronavirus (MERS-CoV) is endemic in camels in the Middle East and is continually causing local outbreaks and epidemics. While all three newly...
The research goal of this project is to establish model synthetic microbial communities to understand the rules regulating their biological function in order to utilize them as next generation bioproduction platforms capable of reducing carbon and nitrogen footprints in biomanufacturing processes.
The research goal of this project is to identify and control host functions hijacked during viral infection through use of PNNL ‘omics technologies and modeling capabilities.
The research objective of this project is to develop an integrative and automated multi-PTM profiling capability with deep proteome coverage.