Filter results
Category
- (-) Earth System Science (29)
- (-) Microbiome Science (6)
- Scientific Discovery (36)
- Biology (35)
- Computational Research (6)
- Data Analytics & Machine Learning (5)
- Human Health (5)
- Integrative Omics (4)
- Computational Mathematics & Statistics (2)
- Computational Mathematics & Statistics (1)
- Computing & Analytics (1)
- Data Analytics & Machine Learning (1)
- Materials Science (1)
- National Security (1)
- Plant Science (1)
Tags
- (-) Soil Microbiology (22)
- (-) Imaging (6)
- (-) Output Databases (2)
- Omics (23)
- sequencing (13)
- Genomics (12)
- Metagenomics (10)
- High Throughput Sequencing (9)
- PerCon SFA (9)
- Microbiome (8)
- Fungi (6)
- Mass Spectrometry (6)
- Mass Spectrometer (5)
- Sequencer System (5)
- Synthetic Biology (5)
- metagenomics (4)
- Microscopy (4)
- Proteomics (4)
- Sequencing (4)
- soil microbiology (4)
- Spectroscopy (4)
- Viruses (4)
- Amplicon Sequencing (3)
- Climate Change (3)
- IAREC (3)
- Mass spectrometry data (3)
- metabolomics (3)
- Whole Genome Sequencing (3)
- microbiome stability (2)
- species volatility (2)
Category
Category
Category
Soil fungi facilitate the translocation of inorganic nutrients from soil minerals to other microorganisms and plants. This ability is particularly advantageous in impoverished soils, because fungal mycelial networks can bridge otherwise spatially disconnected and inaccessible nutrient hotspots...
Category
"DNA Viral Diversity, Abundance, and Functional Potential Vary across Grassland Soils with a Range of Historical Moisture Regimes" Soil viruses are abundant, but the influence of the environment and climate on soil viruses remains poorly understood. Here, we addressed this gap by comparing the...
Category
"Deconstructing the Soil Microbiome into Reduced-Complexity Functional Modules" The soil microbiome represents one of the most complex microbial communities on the planet, encompassing thousands of taxa and metabolic pathways, rendering holistic analyses computationally intensive and difficult. Here...
Category
"Visualizing the Hidden Half: Plant-Microbe Interactions in the Rhizosphere" Plant roots and the associated rhizosphere constitute a dynamic environment that fosters numerous intra- and interkingdom interactions, including metabolite exchange between plants and soil mediated by root exudates and the...
Pending Review Microbiomes contribute to multiple ecosystem services by transforming organic matter in soil. Extreme shifts in the environment, such as drying-rewetting cycles during drought, can impact microbial metabolism of organic matter by altering their physiology and function. These...
A major challenge in biotechnology and biomanufacturing is the identification of a set of biomarkers for perturbations and metabolites of interest. Here, we develop a data-driven, transcriptome-wide approach to rank perturbation-inducible genes from time-series RNA sequencing data for the discovery...
"Moisture modulates soil reservoirs of active DNA and RNA viruses" Soil is known to harbor viruses, but the majority are uncharacterized and their responses to environmental changes are unknown. Here, we used a multi-omics approach (metagenomics, metatranscriptomics and metaproteomics) to detect...
Fusarium sp. DS682 Proteogenomics Statistical Data Analysis of SFA dataset download: 10.25584/KSOmicsFspDS682/1766303 . GitHub Repository Source: https://github.com/lmbramer/Fusarium-sp.-DS-682-Proteogenomics MaxQuant Export Files (txt) Trelliscope Boxplots (jsonp) Fusarium Report (.Rmd, html)...
Last updated on 2023-02-23T19:37:46+00:00 by LN Anderson PerCon SFA Project Publication Experimental Data Catalog The Persistence Control of Engineered Functions in Complex Soil Microbiomes Project (PerCon SFA) at Pacific Northwest National Laboratory ( PNNL ) is a Genomic Sciences Program...
Datasets
3
Bruker Daltonics SolariX Magnetic Resonance Mass Spectrometry (MRMS) instruments are available for different magnetic field strengths of 7T, 12T and 15T. The SolariX XR and 2xR instruments use magnetron control technology and a newly developed, high sensitivity, low noise preamplifier to exploit...
Category
The Nikon Eclipse Ti2-E is a motorized and intelligent model for advanced imaging applications. Compatible with PFS, auto correction collar, and external phase contrast system. The base of choice for live-cell imaging, high-content applications, confocal and super-resolution.As research trends...