This data package consists of data from human islets (n=8) treated with IFNγ + IL-1β for 24 h and submitted to phosphoproteomics ( Table 1 ). Data contributor: Wei-Jun Qian: Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA. Data repository: PXD011857...
Filter results
Category
- (-) Integrative Omics (97)
- (-) Plant Science (4)
- Scientific Discovery (407)
- Biology (288)
- Earth System Science (169)
- Human Health (113)
- Microbiome Science (50)
- National Security (32)
- Computational Research (25)
- Energy Resiliency (22)
- Computing & Analytics (18)
- Renewable Energy (14)
- Chemical & Biological Signatures Science (12)
- Weapons of Mass Effect (12)
- Materials Science (11)
- Chemistry (10)
- Data Analytics & Machine Learning (9)
- Water Power (8)
- Computational Mathematics & Statistics (7)
- Data Analytics & Machine Learning (7)
- Atmospheric Science (6)
- Ecosystem Science (6)
- Visual Analytics (6)
- Coastal Science (4)
- Energy Storage (4)
- Solar Energy (4)
- Bioenergy Technologies (3)
- Energy Efficiency (3)
- Transportation (3)
- Cybersecurity (2)
- Distribution (2)
- Electric Grid Modernization (2)
- Grid Cybersecurity (2)
- Subsurface Science (2)
- Wind Energy (2)
- Advanced Lighting (1)
- Computational Mathematics & Statistics (1)
- Environmental Management (1)
- Federal Buildings (1)
- Geothermal Energy (1)
- Grid Analytics (1)
- Grid Energy Storage (1)
- High-Performance Computing (1)
- Terrestrial Aquatics (1)
- Vehicle Technologies (1)
- Waste Processing (1)
Tags
- Virology (55)
- Immune Response (51)
- Time Sampled Measurement Datasets (50)
- Differential Expression Analysis (46)
- Gene expression profile data (45)
- Homo sapiens (34)
- Multi-Omics (32)
- Mass spectrometry data (30)
- Mus musculus (19)
- MERS-CoV (18)
- West Nile virus (13)
- Influenza A (11)
- Mass Spectrometry (10)
- Omics (10)
- Ebola (9)
- Resource Metadata (7)
- Human Interferon (6)
- Microarray (6)
- Omics-LHV Project (6)
- Proteomics (6)
- Imaging (4)
- Mass Spectrometer (4)
- metabolomics (3)
- Microscopy (3)
- Response to type I interferon (3)
- Epigenetics (2)
- Lipidomics (2)
- Soil Microbiology (2)
- Spectroscopy (2)
- Viral Experiment (2)
This data package consists of data from MIN6 cells (n=4) treated with IL-1β + IFNγ + TNFα for 24 h post-RNAi targeting ADP-ribosylhydrolase ARH3 (Adprhl2), and submitted to proteomics analysis ( Table 1 ). ARH3 is a hydrolase that keeps cellular ADP-ribosylation levels in check and is regulated by...
Category
This data package consists of data from MIN6 cells (n=4) treated with IL-1β + IFNγ + TNFα and RNAi targeting Poly(ADP)ribosyl polymerase 12 ( Parp12 ) for 24 h and submitted to proteomic analyses ( Table 1 ). PARP12 is an interferon-induced protein known to target viral RNA to stress granules. It...
Category
The data package consists of RNA-seq datasets of EndoC-βH1 cells treated in parallel with IFNα, IFNγ, IL-1β and TNFα for 24 h and submitted to RNA-seq (n=4) ( Table 1 ) Data contributors: Arturo Roca-Rivada, Xiaoyan Yi & Décio L. Eizirik: ULB Center for Diabetes Research, Medical Faculty, Université...
Category
This data package consists data from EndoC-βH1 (n=6) treated with IFNα for 8 and 24 h and submitted to RNA-seq analysis ( Table 1 ). This was generated in parallel with Pck008. Data contributors: Arturo Roca-Rivada, Xiaoyan Yi & Décio L. Eizirik: ULB Center for Diabetes Research, Medical Faculty...
Category
This data package consists of data from human islets (n=5) treated with IFNγ + IL-1β with or without difluoromethylornithine (DFMO) and submitted to RNA-seq and proteomics analysis ( Table 1 ). DFMO is an inhibitor of ornithine decarboxylase (ODC), an enzyme of the polyamine pathway. Therefore, this...
Category
This data package consists of data from human islets (n=5) treated with IFNγ + IL-1β for 48 h and submitted to RNA-seq analysis ( Table 1 ). Data contributors: Arturo Roca-Rivada, Xiaoyan Yi & Décio L. Eizirik: ULB Center for Diabetes Research, Medical Faculty, Université Libre de Bruxelles...
Category
RhizoGrid Indexed Sorghum Rhizosphere Multi-Omics Identification of spatially resolved biomarkers of drought in Sorghum bicolor rhizosphere molecular-microbe interactions using a novel root cartography "RhizoGrid" system for sampling plants under drought and control conditions across 10 equally...
This data package contains processed LC-MS proteomics results and analysis scripts associated with the paper "Assessing Degenerate Peptide Resolution Methods using a Ground Truth Dataset". In this study, we designed an artificial microbial community to create a ground truth, simulated metaproteomic...
Category
Dataset Description The goal of the experiment was to demonstrate that the optimized multiplexed multi-PTM profiling workflow can comprehensively and quantitatively capture dynamic changes in protein abundance, cysteine oxidation, phosphorylation, and acetylation in cytokine-induced inflammatory...
Category
This dataset presents land surface parameters designed explicitly for global kilometer-scale Earth system modeling and has significant implications for enhancing our understanding of water, carbon, and energy cycles in the context of global change. Specifically, it includes four categories of...
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL005 Metadata The purpose of this experiment was to evaluate the human host epigenetic response to MERS-CoV virus infection. Samples were obtained from human lung adenocarcinoma cells (Calu-3) and processed for...
Category
Last updated on 2024-02-11T22:41:43+00:00 by LN Anderson MERS-CoV Experiment MCL004 Metadata The purpose of this experiment was to evaluate the host response to MERS-CoV virus infection. Sample data was obtained from human lung adenocarcinoma cells (Calu-3) and processed for genome binding/occupancy...
Category
Omics-LHV, West Nile Experiment WGCN004 The purpose of this West Nile experiment was to obtain samples for omics analysis in primary mouse granule neuron cells infected with wild type West Nile virus (WNV-NY99 clone 382, WNVWT) and mutant virus (WNVE218A). Overall Design: Granule cell neurons from...
Category
Last updated on 2025-01-16T22:12:33+00:00 by LN Anderson Fungal Monoisolate Multi-Omics Data Package DOI "KS4A-Omics1.0_FspDS68" Molecular mechanisms underlying fungal mineral weathering and nutrient translocation in low nutrient environments remain poorly resolved, due to the lack of a platform for...