ProxyTSPRD profiles are collected using NVIDIA Nsight Systems version 2020.3.2.6-87e152c and capture computational patterns from training deep learning-based time-series proxy-applications on four different levels: models (Long short-term Memory and Convolutional Neural Network), DL frameworks...

Version of previously released anthropogenic SO2 emissions data re-generated with altered spatial distributions for shipping emissions for use in the Emissions-MIP model inter-comparison project. Also included are 30% and 60% global reductions in shipping SO2 emissions.

Cu-Ni bilayers either without defects (pristine) or with a single vacancy in the nickel layer at the interface (1-Ni-1), in the copper layer at the interface (1-Cu-1), in the central nickel layer (1-Ni-3), or in the central copper layer (1-Cu-3) were relaxed under the application of shear in the...

Please cite as : McClure R.S., Y. Farris, R.E. Danczak, W.C. Nelson, H. Song, A. Kessler, and J. Lee, et al. 2022. 16s data from MSC-2 growth. [Data Set] PNNL DataHub. https://data.pnnl.gov/group/nodes/dataset/33231 16s data from MSC-2 growth 3 fastq of 16s amplicon data of MSC2 1 csv file of raw...

Please cite as : McClure R.S., Y. Farris, R.E. Danczak, W.C. Nelson, H. Song, A. Kessler, and J. Lee, et al. 2022. Metatranscriptomic data from MSC-2. [Data Set] PNNL DataHub. https://data.pnnl.gov/group/nodes/dataset/33232 Metatranscriptomic data from MSC-2 12 fastq files (6 forward read, 6 reverse...

A pre-trained convolutional neural network was fine-tuned for three separate classification tasks, distinguishing 2D images of: 1) single amino acids, 2) protein structural ball and stick images of metalloproteins, and 3) protein structural ball and stick images of metalloenzymes with the metal...

We present a dataset of structural relaxations of bulk ternary transition metal dichalcogenides (TMDs) computed via plane-wave density functional theory (DFT). We examined combinations of up to two chalcogenides with seven transition metals from groups 4-6 in octahedral (1T) or trigonal prismatic...

Ice nucleating particles (INPs) are a rare subset of atmospheric aerosol that can initiate primary ice formation and thus trigger cloud glaciation. There is a significant gap between our ability to measure INPs and to predict their concentrations and variability in large-scale weather and climate...

The demonstrated success of transfer learning has popularized approaches that involve pretraining models from massive data sources and subsequent finetuning towards a specific task. While such approaches have become the norm in fields such as natural language processing, implementation and...

Please cite as : McClure R.S., M.R. Garcia, S.P. Couvillion, and K.S. Hofmockel. 2022. 16s MSC-2 Leaveout Data. [Data Set] PNNL DataHub. https://doi.org/10.25584/PNNLDH/1986543 Understanding how microorganisms within a soil community interact to support collective respiration and growth remains...

Data comprised of 204, 103, 89, 66, 30, and 16 gas chromatography mass spectrometry (GC-MS) runs from human cerebrospinal fluid (CSF), standards, human blood plasma, human urine, fungi species (A. niger, A. nidulans, T. reesei), and soil crust, respectively Across 4,523,251 candidate matches, 13,487...

Please cite as : Wu R., M.R. Davison, W.C. Nelson, M.L. Smith, M.S. Lipton, J.K. Jansson, and R.S. McClure, et al. 2023. HiC manuscript: bulk metagenomic data_MG_raw Upload. [Data Set] PNNL DataHub. https://doi.org/10.25584/1922087 The raw bulk metagenomic data were trimmed and de-novo assembled...

Assembly product (viral contigs and MAGs) includes the dereplicated viral contigs and the finalized MAGs Note: ADDENDUM LINK REQUIRED for full download https://g-83fdd0.1beed.03c0.data.globus.org/MG_assembly_coassemblies.tar

Hi-C Viral Host Links: virus-host associations indicated by Hi-C sequencing were processed by Phase Genomics by folowing the protocal, https://www.biorxiv.org/content/10.1101/2021.06.14.448389v1.full

The raw metatranscriptome data collected along the course of metaphenome incubation were trimmed and quality controlled.