Created 2025-06-03T23:16:59+00:00 by LN Anderson .Currently pending DOI assignment for public release. Integrative SP3 Workflow for Multi-PTM Proteomics Profiling (PPI-TZ-DP0) The purpose of this experiment was to evaluate a new standardized method approach for proteomics sample processing designed...
Created 2024-12-22T20:31:04+00:00 by LN Anderson Rhodotorula toruloides Nitrogen Limitation PTM Profiling Multi-Omics (TZ-DP1) The purpose of this experiment was to evaluate the regulatory stress response of Oleaginous yeast species Rhodotorula toruloides NBRC 0880 (JGI strain IFO0880 v4.0 ) under...
Currently pending public release.
Created on 2024-10-16T17:27:40+00:00 by LN Anderson ; Last updated 2025-08-01T15:13:46+00:00. S. elongatus PCC 7942 LiP and TPP Structural Proteomics (JM-PB-DP3) The purpose of this experiment was to investigate structural alterations in proteins involved in central carbon metabolism and...
Currently pending public release.
Currently pending public release.
Currently pending public release.
Last updated by LN Anderson on 2025-09-03T17:50:50+00:00 S. elongatus PCC 7942 Carbon Metabolism Proteomics (MC-DP2) The purpose of this experiment was to understand the regulatory dynamics of carbon fixation in S. elongatus PCC 7942 under light and dark treatment conditions using a tandem mass tag...
Created on 2024-09-17 by LN Anderson ; Last updated 2025-12-01 PerCon SFA: Profiling sorghum-microbe interactions with a specialized photoaffinity probe identifies key sorgoleone binders in Acinetobacter pitti Mass spectrometry-based global proteome analysis and SoDA-PAL photoaffinity probe labeled...
Last updated on 2025-01-16T22:12:33+00:00 by LN Anderson Fungal Monoisolate Multi-Omics Data Package DOI "KS4A-Omics1.0_FspDS68" Molecular mechanisms underlying fungal mineral weathering and nutrient translocation in low nutrient environments remain poorly resolved, due to the lack of a platform for...
Biomedical Resilience & Readiness in Adverse Operating Environments (BRAVE) Project: Exhaled Breath Condensate (EBC) TMT Proteomic Transformation Data Exhaled breath condensate (EBC) represents a low-cost and non-invasive means of examining respiratory health. EBC has been used to discover and...
Primary publication pre-print. Cite as: arXiv:2410.09346 [q-bio.MN]
Citation : Reichart NJ, Steiger AK, Van Fossen EM, McClure R, Overkleeft HS, Wright AT. Selection and enrichment of microbial species with an increased lignocellulolytic phenotype from a native soil microbiome by activity-based probing. ISME Commun. 2023 Sep 30;3(1):106. doi: 10.1038/s43705-023...
The recently developed real-time nuclear–electronic orbital (RT-NEO) approach provides an elegant framework for treating electrons and selected nuclei, typically protons, quantum mechanically in nonequilibrium dynamical processes. However, the RT-NEO approach neglects the motion of the other nuclei...
Biography Ernesto Nakayasu is a senior research scientist focused on understanding molecular mechanisms of diseases. Nakayasu has been applying systems biology and mass spectrometry-based omics measurements to study how pathogens and metabolic alterations cause human diseases; the goal is to...
