Created 2025-06-03T23:16:59+00:00 by LN Anderson Integrative SP3 Workflow for Multi-PTM Proteomics Profiling (PPI-TZ-DP0) The purpose of this experiment was to evaluate a new standardized method approach for proteomics sample processing designed to facilitate multiplexed quantification of protein...
Created 2024-12-22T20:31:04+00:00 by LN Anderson ; Last updated 2025-02-04T20:14:18+00:00 and is pending public release. Rhodotorula toruloides Nitrogen Limitation PTM Profiling Multi-Omics (TZ-DP1) The purpose of this experiment was to evaluate the regulatory stress response of Oleaginous yeast...
Created on 2024-10-16T17:27:40+00:00 by LN Anderson . Pending updates will be available for public release before or by 2025-10-01.
Created on 2024-10-16T17:27:40+00:00 by LN Anderson . Pending updates will be available for public release before or by 2025-10-01.
Created on 2025-06-10T00:34:54+00:00 by LN Anderson
Created on 2024-10-14T20:33:54+00:00 by LN Anderson pending updates.
Created on 2024-10-14T20:33:54+00:00 by LN Anderson . Pending updates will be available for public release before or by 2025-10-01.
Created on 2024-10-14T20:33:54+00:00 by LN Anderson ; Last Updated 2024-11-13T15:01:44+00:00 and is pending public release. S. elongatus PCC 7942 Carbon Metabolism Proteomics (MC-DP2) The purpose of this experiment was to understand the regulatory dynamics of carbon fixation in S. elongatus PCC 7942...
Last updated on 2024-09-17T15:49:08+00:00 by LN Anderson PerCon SFA: Profiling sorghum-microbe interactions with a specialized photoaffinity probe identifies key sorgoleone binders in Acinetobacter pitti Mass spectrometry-based global proteome analysis and SoDA-PAL photoaffinity probe labeled...
Last updated on 2023-05-31T16:35:53+00:00 by LN Anderson PerCon SFA: Sequencing of Sorgoleone Promoting Rhizobacteria Isolates Whole genome sequencing (WGS) of sorgoleone utilizing rhizobacteria strains Pseudomonas sorgoleonovorans SO81 , Burkholderia anthina SO82 , and Acinetobacter pittii SO1 , as...
Last updated on 2023-03-21T18:35:22+00:00 by LN Anderson SAGE-RTP RT-PCR Amplicon Sequencing Barcode Count Analysis Promoter expression data for five bacterial species associated with the Serine recombinase Assisted Genome Engineering (SAGE) research project. Raw Measurement Data NCBI BioProject...
Biomedical Resilience & Readiness in Adverse Operating Environments (BRAVE) Project: Exhaled Breath Condensate (EBC) TMT Proteomic Transformation Data Exhaled breath condensate (EBC) represents a low-cost and non-invasive means of examining respiratory health. EBC has been used to discover and...
Primary publication pre-print. Cite as: arXiv:2410.09346 [q-bio.MN]
Citation : Reichart NJ, Steiger AK, Van Fossen EM, McClure R, Overkleeft HS, Wright AT. Selection and enrichment of microbial species with an increased lignocellulolytic phenotype from a native soil microbiome by activity-based probing. ISME Commun. 2023 Sep 30;3(1):106. doi: 10.1038/s43705-023...
A major challenge in biotechnology and biomanufacturing is the identification of a set of biomarkers for perturbations and metabolites of interest. Here, we develop a data-driven, transcriptome-wide approach to rank perturbation-inducible genes from time-series RNA sequencing data for the discovery...